Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20147 | 60664;60665;60666 | chr2:178591286;178591285;178591284 | chr2:179456013;179456012;179456011 |
N2AB | 18506 | 55741;55742;55743 | chr2:178591286;178591285;178591284 | chr2:179456013;179456012;179456011 |
N2A | 17579 | 52960;52961;52962 | chr2:178591286;178591285;178591284 | chr2:179456013;179456012;179456011 |
N2B | 11082 | 33469;33470;33471 | chr2:178591286;178591285;178591284 | chr2:179456013;179456012;179456011 |
Novex-1 | 11207 | 33844;33845;33846 | chr2:178591286;178591285;178591284 | chr2:179456013;179456012;179456011 |
Novex-2 | 11274 | 34045;34046;34047 | chr2:178591286;178591285;178591284 | chr2:179456013;179456012;179456011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs754537684 | -1.384 | 1.0 | D | 0.839 | 0.678 | 0.836966666681 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.96528E-04 | None | 0 | 0 | 0 |
G/E | rs754537684 | -1.384 | 1.0 | D | 0.839 | 0.678 | 0.836966666681 | gnomAD-4.0.0 | 8.21335E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.27643E-04 | 1.65711E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2926 | likely_benign | 0.2905 | benign | -0.677 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | D | 0.557057218 | None | None | N |
G/C | 0.6285 | likely_pathogenic | 0.6232 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
G/D | 0.7739 | likely_pathogenic | 0.7705 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
G/E | 0.8001 | likely_pathogenic | 0.7963 | pathogenic | -1.12 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.642533094 | None | None | N |
G/F | 0.9577 | likely_pathogenic | 0.9578 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
G/H | 0.862 | likely_pathogenic | 0.8543 | pathogenic | -1.268 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
G/I | 0.9368 | likely_pathogenic | 0.9372 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
G/K | 0.7672 | likely_pathogenic | 0.7704 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/L | 0.8827 | likely_pathogenic | 0.8784 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
G/M | 0.8913 | likely_pathogenic | 0.8886 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
G/N | 0.7743 | likely_pathogenic | 0.7551 | pathogenic | -0.822 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/P | 0.9971 | likely_pathogenic | 0.9971 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
G/Q | 0.717 | likely_pathogenic | 0.708 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
G/R | 0.6344 | likely_pathogenic | 0.6372 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.64233129 | None | None | N |
G/S | 0.2825 | likely_benign | 0.2638 | benign | -1.088 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
G/T | 0.6491 | likely_pathogenic | 0.6388 | pathogenic | -1.071 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
G/V | 0.8405 | likely_pathogenic | 0.8441 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.642533094 | None | None | N |
G/W | 0.9339 | likely_pathogenic | 0.9321 | pathogenic | -1.403 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.642734898 | None | None | N |
G/Y | 0.935 | likely_pathogenic | 0.9366 | pathogenic | -0.985 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.