Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20151 | 60676;60677;60678 | chr2:178591274;178591273;178591272 | chr2:179456001;179456000;179455999 |
N2AB | 18510 | 55753;55754;55755 | chr2:178591274;178591273;178591272 | chr2:179456001;179456000;179455999 |
N2A | 17583 | 52972;52973;52974 | chr2:178591274;178591273;178591272 | chr2:179456001;179456000;179455999 |
N2B | 11086 | 33481;33482;33483 | chr2:178591274;178591273;178591272 | chr2:179456001;179456000;179455999 |
Novex-1 | 11211 | 33856;33857;33858 | chr2:178591274;178591273;178591272 | chr2:179456001;179456000;179455999 |
Novex-2 | 11278 | 34057;34058;34059 | chr2:178591274;178591273;178591272 | chr2:179456001;179456000;179455999 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs746925706 | -2.288 | 0.117 | N | 0.683 | 0.295 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs746925706 | -2.288 | 0.117 | N | 0.683 | 0.295 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs746925706 | -2.288 | 0.117 | N | 0.683 | 0.295 | None | gnomAD-4.0.0 | 6.57765E-06 | None | None | None | None | N | None | 2.41406E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9211 | likely_pathogenic | 0.9404 | pathogenic | -2.225 | Highly Destabilizing | 0.067 | N | 0.617 | neutral | None | None | None | None | N |
I/C | 0.9177 | likely_pathogenic | 0.9328 | pathogenic | -1.734 | Destabilizing | 0.791 | D | 0.761 | deleterious | None | None | None | None | N |
I/D | 0.9982 | likely_pathogenic | 0.9987 | pathogenic | -2.403 | Highly Destabilizing | 0.791 | D | 0.823 | deleterious | None | None | None | None | N |
I/E | 0.9939 | likely_pathogenic | 0.995 | pathogenic | -2.237 | Highly Destabilizing | 0.555 | D | 0.802 | deleterious | None | None | None | None | N |
I/F | 0.4199 | ambiguous | 0.5285 | ambiguous | -1.362 | Destabilizing | 0.062 | N | 0.645 | neutral | N | 0.508349448 | None | None | N |
I/G | 0.9849 | likely_pathogenic | 0.9894 | pathogenic | -2.723 | Highly Destabilizing | 0.555 | D | 0.799 | deleterious | None | None | None | None | N |
I/H | 0.9898 | likely_pathogenic | 0.9925 | pathogenic | -2.159 | Highly Destabilizing | 0.935 | D | 0.841 | deleterious | None | None | None | None | N |
I/K | 0.9869 | likely_pathogenic | 0.9892 | pathogenic | -1.558 | Destabilizing | 0.262 | N | 0.801 | deleterious | None | None | None | None | N |
I/L | 0.0657 | likely_benign | 0.0689 | benign | -0.822 | Destabilizing | None | N | 0.261 | neutral | N | 0.387559252 | None | None | N |
I/M | 0.1198 | likely_benign | 0.1386 | benign | -0.881 | Destabilizing | 0.188 | N | 0.634 | neutral | N | 0.456959562 | None | None | N |
I/N | 0.9771 | likely_pathogenic | 0.982 | pathogenic | -1.765 | Destabilizing | 0.741 | D | 0.832 | deleterious | N | 0.475570796 | None | None | N |
I/P | 0.9952 | likely_pathogenic | 0.9964 | pathogenic | -1.267 | Destabilizing | 0.791 | D | 0.831 | deleterious | None | None | None | None | N |
I/Q | 0.9844 | likely_pathogenic | 0.9871 | pathogenic | -1.725 | Destabilizing | 0.791 | D | 0.833 | deleterious | None | None | None | None | N |
I/R | 0.9818 | likely_pathogenic | 0.9852 | pathogenic | -1.237 | Destabilizing | 0.555 | D | 0.82 | deleterious | None | None | None | None | N |
I/S | 0.9804 | likely_pathogenic | 0.9857 | pathogenic | -2.469 | Highly Destabilizing | 0.211 | N | 0.744 | deleterious | N | 0.475317306 | None | None | N |
I/T | 0.9612 | likely_pathogenic | 0.9715 | pathogenic | -2.16 | Highly Destabilizing | 0.117 | N | 0.683 | prob.neutral | N | 0.475063817 | None | None | N |
I/V | 0.1351 | likely_benign | 0.161 | benign | -1.267 | Destabilizing | 0.005 | N | 0.354 | neutral | N | 0.442161741 | None | None | N |
I/W | 0.9776 | likely_pathogenic | 0.9843 | pathogenic | -1.687 | Destabilizing | 0.935 | D | 0.835 | deleterious | None | None | None | None | N |
I/Y | 0.9227 | likely_pathogenic | 0.9437 | pathogenic | -1.385 | Destabilizing | 0.555 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.