Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20157 | 60694;60695;60696 | chr2:178591256;178591255;178591254 | chr2:179455983;179455982;179455981 |
N2AB | 18516 | 55771;55772;55773 | chr2:178591256;178591255;178591254 | chr2:179455983;179455982;179455981 |
N2A | 17589 | 52990;52991;52992 | chr2:178591256;178591255;178591254 | chr2:179455983;179455982;179455981 |
N2B | 11092 | 33499;33500;33501 | chr2:178591256;178591255;178591254 | chr2:179455983;179455982;179455981 |
Novex-1 | 11217 | 33874;33875;33876 | chr2:178591256;178591255;178591254 | chr2:179455983;179455982;179455981 |
Novex-2 | 11284 | 34075;34076;34077 | chr2:178591256;178591255;178591254 | chr2:179455983;179455982;179455981 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs2050133454 | None | 0.977 | D | 0.678 | 0.47 | 0.491523185611 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
A/T | rs2050133454 | None | 0.977 | D | 0.678 | 0.47 | 0.491523185611 | gnomAD-4.0.0 | 6.57601E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.41265E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5293 | ambiguous | 0.6204 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
A/D | 0.7871 | likely_pathogenic | 0.8838 | pathogenic | -0.419 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | D | 0.527540515 | None | None | I |
A/E | 0.677 | likely_pathogenic | 0.8078 | pathogenic | -0.56 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | I |
A/F | 0.4776 | ambiguous | 0.6334 | pathogenic | -0.926 | Destabilizing | 0.995 | D | 0.761 | deleterious | None | None | None | None | I |
A/G | 0.262 | likely_benign | 0.3057 | benign | -0.245 | Destabilizing | 0.989 | D | 0.651 | neutral | N | 0.48617699 | None | None | I |
A/H | 0.7414 | likely_pathogenic | 0.841 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
A/I | 0.3298 | likely_benign | 0.4842 | ambiguous | -0.452 | Destabilizing | 0.966 | D | 0.637 | neutral | None | None | None | None | I |
A/K | 0.8202 | likely_pathogenic | 0.9032 | pathogenic | -0.465 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | I |
A/L | 0.3312 | likely_benign | 0.4461 | ambiguous | -0.452 | Destabilizing | 0.966 | D | 0.578 | neutral | None | None | None | None | I |
A/M | 0.3613 | ambiguous | 0.4761 | ambiguous | -0.577 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
A/N | 0.604 | likely_pathogenic | 0.7205 | pathogenic | -0.218 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | I |
A/P | 0.8929 | likely_pathogenic | 0.9332 | pathogenic | -0.364 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | D | 0.54564477 | None | None | I |
A/Q | 0.6584 | likely_pathogenic | 0.7651 | pathogenic | -0.448 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | I |
A/R | 0.741 | likely_pathogenic | 0.8394 | pathogenic | -0.097 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | None | None | None | None | I |
A/S | 0.134 | likely_benign | 0.1539 | benign | -0.421 | Destabilizing | 0.989 | D | 0.651 | neutral | D | 0.530904673 | None | None | I |
A/T | 0.1504 | likely_benign | 0.2066 | benign | -0.489 | Destabilizing | 0.977 | D | 0.678 | prob.neutral | D | 0.542349406 | None | None | I |
A/V | 0.1442 | likely_benign | 0.2096 | benign | -0.364 | Destabilizing | 0.235 | N | 0.499 | neutral | N | 0.516588582 | None | None | I |
A/W | 0.9127 | likely_pathogenic | 0.9588 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
A/Y | 0.7205 | likely_pathogenic | 0.8256 | pathogenic | -0.712 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.