Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20163 | 60712;60713;60714 | chr2:178591238;178591237;178591236 | chr2:179455965;179455964;179455963 |
N2AB | 18522 | 55789;55790;55791 | chr2:178591238;178591237;178591236 | chr2:179455965;179455964;179455963 |
N2A | 17595 | 53008;53009;53010 | chr2:178591238;178591237;178591236 | chr2:179455965;179455964;179455963 |
N2B | 11098 | 33517;33518;33519 | chr2:178591238;178591237;178591236 | chr2:179455965;179455964;179455963 |
Novex-1 | 11223 | 33892;33893;33894 | chr2:178591238;178591237;178591236 | chr2:179455965;179455964;179455963 |
Novex-2 | 11290 | 34093;34094;34095 | chr2:178591238;178591237;178591236 | chr2:179455965;179455964;179455963 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.22 | N | 0.57 | 0.239 | 0.57179433898 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5066 | ambiguous | 0.5337 | ambiguous | -0.969 | Destabilizing | 0.968 | D | 0.606 | neutral | None | None | None | None | N |
A/D | 0.3386 | likely_benign | 0.4358 | ambiguous | -1.093 | Destabilizing | 0.497 | N | 0.78 | deleterious | N | 0.490383415 | None | None | N |
A/E | 0.369 | ambiguous | 0.4625 | ambiguous | -1.136 | Destabilizing | 0.567 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/F | 0.39 | ambiguous | 0.4469 | ambiguous | -0.848 | Destabilizing | 0.89 | D | 0.822 | deleterious | None | None | None | None | N |
A/G | 0.1373 | likely_benign | 0.1517 | benign | -0.962 | Destabilizing | 0.001 | N | 0.315 | neutral | D | 0.524920063 | None | None | N |
A/H | 0.4987 | ambiguous | 0.5701 | pathogenic | -1.084 | Destabilizing | 0.968 | D | 0.805 | deleterious | None | None | None | None | N |
A/I | 0.253 | likely_benign | 0.306 | benign | -0.26 | Destabilizing | 0.726 | D | 0.742 | deleterious | None | None | None | None | N |
A/K | 0.4622 | ambiguous | 0.5557 | ambiguous | -1.259 | Destabilizing | 0.567 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/L | 0.1792 | likely_benign | 0.2038 | benign | -0.26 | Destabilizing | 0.272 | N | 0.689 | prob.neutral | None | None | None | None | N |
A/M | 0.2289 | likely_benign | 0.2443 | benign | -0.359 | Destabilizing | 0.968 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/N | 0.2526 | likely_benign | 0.3009 | benign | -0.986 | Destabilizing | 0.567 | D | 0.822 | deleterious | None | None | None | None | N |
A/P | 0.123 | likely_benign | 0.1689 | benign | -0.375 | Destabilizing | 0.001 | N | 0.372 | neutral | N | 0.499042971 | None | None | N |
A/Q | 0.392 | ambiguous | 0.4564 | ambiguous | -1.142 | Destabilizing | 0.726 | D | 0.741 | deleterious | None | None | None | None | N |
A/R | 0.4504 | ambiguous | 0.5266 | ambiguous | -0.863 | Destabilizing | 0.726 | D | 0.741 | deleterious | None | None | None | None | N |
A/S | 0.1008 | likely_benign | 0.1064 | benign | -1.281 | Destabilizing | 0.011 | N | 0.371 | neutral | N | 0.414114788 | None | None | N |
A/T | 0.0969 | likely_benign | 0.104 | benign | -1.226 | Destabilizing | 0.124 | N | 0.576 | neutral | N | 0.45530805 | None | None | N |
A/V | 0.141 | likely_benign | 0.1606 | benign | -0.375 | Destabilizing | 0.22 | N | 0.57 | neutral | N | 0.461794092 | None | None | N |
A/W | 0.7669 | likely_pathogenic | 0.8057 | pathogenic | -1.162 | Destabilizing | 0.968 | D | 0.792 | deleterious | None | None | None | None | N |
A/Y | 0.543 | ambiguous | 0.603 | pathogenic | -0.771 | Destabilizing | 0.89 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.