Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20166 | 60721;60722;60723 | chr2:178591229;178591228;178591227 | chr2:179455956;179455955;179455954 |
N2AB | 18525 | 55798;55799;55800 | chr2:178591229;178591228;178591227 | chr2:179455956;179455955;179455954 |
N2A | 17598 | 53017;53018;53019 | chr2:178591229;178591228;178591227 | chr2:179455956;179455955;179455954 |
N2B | 11101 | 33526;33527;33528 | chr2:178591229;178591228;178591227 | chr2:179455956;179455955;179455954 |
Novex-1 | 11226 | 33901;33902;33903 | chr2:178591229;178591228;178591227 | chr2:179455956;179455955;179455954 |
Novex-2 | 11293 | 34102;34103;34104 | chr2:178591229;178591228;178591227 | chr2:179455956;179455955;179455954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | N | 0.867 | 0.677 | 0.882114022096 | gnomAD-4.0.0 | 1.3687E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79923E-06 | 0 | 0 |
L/I | None | None | 0.248 | N | 0.331 | 0.236 | 0.580087410829 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43336E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8974 | likely_pathogenic | 0.8986 | pathogenic | -2.966 | Highly Destabilizing | 0.97 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/C | 0.8232 | likely_pathogenic | 0.8291 | pathogenic | -2.378 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
L/D | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -3.637 | Highly Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
L/E | 0.9953 | likely_pathogenic | 0.9961 | pathogenic | -3.327 | Highly Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | N |
L/F | 0.5864 | likely_pathogenic | 0.6709 | pathogenic | -1.814 | Destabilizing | 0.994 | D | 0.748 | deleterious | N | 0.479977883 | None | None | N |
L/G | 0.9859 | likely_pathogenic | 0.9878 | pathogenic | -3.593 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
L/H | 0.9839 | likely_pathogenic | 0.9872 | pathogenic | -3.179 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.510705891 | None | None | N |
L/I | 0.127 | likely_benign | 0.1421 | benign | -1.092 | Destabilizing | 0.248 | N | 0.331 | neutral | N | 0.510233039 | None | None | N |
L/K | 0.9916 | likely_pathogenic | 0.9924 | pathogenic | -2.433 | Highly Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
L/M | 0.2515 | likely_benign | 0.2691 | benign | -1.187 | Destabilizing | 0.996 | D | 0.733 | prob.delet. | None | None | None | None | N |
L/N | 0.994 | likely_pathogenic | 0.9941 | pathogenic | -3.061 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
L/P | 0.9955 | likely_pathogenic | 0.997 | pathogenic | -1.706 | Destabilizing | 0.998 | D | 0.872 | deleterious | N | 0.510705891 | None | None | N |
L/Q | 0.9783 | likely_pathogenic | 0.98 | pathogenic | -2.766 | Highly Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
L/R | 0.9835 | likely_pathogenic | 0.9858 | pathogenic | -2.324 | Highly Destabilizing | 0.998 | D | 0.838 | deleterious | N | 0.510705891 | None | None | N |
L/S | 0.9858 | likely_pathogenic | 0.9868 | pathogenic | -3.724 | Highly Destabilizing | 0.996 | D | 0.838 | deleterious | None | None | None | None | N |
L/T | 0.9172 | likely_pathogenic | 0.9168 | pathogenic | -3.243 | Highly Destabilizing | 0.97 | D | 0.781 | deleterious | None | None | None | None | N |
L/V | 0.1148 | likely_benign | 0.126 | benign | -1.706 | Destabilizing | 0.122 | N | 0.329 | neutral | N | 0.388786695 | None | None | N |
L/W | 0.9691 | likely_pathogenic | 0.9802 | pathogenic | -2.259 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
L/Y | 0.963 | likely_pathogenic | 0.972 | pathogenic | -2.023 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.