Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20167 | 60724;60725;60726 | chr2:178591226;178591225;178591224 | chr2:179455953;179455952;179455951 |
N2AB | 18526 | 55801;55802;55803 | chr2:178591226;178591225;178591224 | chr2:179455953;179455952;179455951 |
N2A | 17599 | 53020;53021;53022 | chr2:178591226;178591225;178591224 | chr2:179455953;179455952;179455951 |
N2B | 11102 | 33529;33530;33531 | chr2:178591226;178591225;178591224 | chr2:179455953;179455952;179455951 |
Novex-1 | 11227 | 33904;33905;33906 | chr2:178591226;178591225;178591224 | chr2:179455953;179455952;179455951 |
Novex-2 | 11294 | 34105;34106;34107 | chr2:178591226;178591225;178591224 | chr2:179455953;179455952;179455951 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | D | 0.816 | 0.455 | 0.642232531769 | gnomAD-4.0.0 | 6.84356E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99622E-07 | 0 | 0 |
T/P | None | None | 1.0 | D | 0.798 | 0.557 | 0.66854072215 | gnomAD-4.0.0 | 1.59204E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
T/S | rs2050127510 | None | 0.999 | D | 0.577 | 0.421 | 0.508696012846 | gnomAD-4.0.0 | 1.36871E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79924E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.135 | likely_benign | 0.1573 | benign | -0.895 | Destabilizing | 0.999 | D | 0.572 | neutral | N | 0.50153254 | None | None | N |
T/C | 0.5368 | ambiguous | 0.5977 | pathogenic | -0.623 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
T/D | 0.5692 | likely_pathogenic | 0.6186 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
T/E | 0.455 | ambiguous | 0.5304 | ambiguous | -0.374 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
T/F | 0.3859 | ambiguous | 0.4541 | ambiguous | -0.691 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/G | 0.5352 | ambiguous | 0.5691 | pathogenic | -1.22 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
T/H | 0.2759 | likely_benign | 0.3305 | benign | -1.4 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
T/I | 0.1869 | likely_benign | 0.2324 | benign | -0.098 | Destabilizing | 1.0 | D | 0.816 | deleterious | D | 0.526037571 | None | None | N |
T/K | 0.2618 | likely_benign | 0.3151 | benign | -0.788 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
T/L | 0.1308 | likely_benign | 0.1532 | benign | -0.098 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/M | 0.0977 | likely_benign | 0.1139 | benign | 0.046 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/N | 0.1462 | likely_benign | 0.1726 | benign | -0.907 | Destabilizing | 1.0 | D | 0.788 | deleterious | D | 0.526498931 | None | None | N |
T/P | 0.8135 | likely_pathogenic | 0.8403 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.536161342 | None | None | N |
T/Q | 0.2705 | likely_benign | 0.3083 | benign | -0.955 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
T/R | 0.2392 | likely_benign | 0.2865 | benign | -0.652 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
T/S | 0.1667 | likely_benign | 0.1921 | benign | -1.206 | Destabilizing | 0.999 | D | 0.577 | neutral | D | 0.526786933 | None | None | N |
T/V | 0.1559 | likely_benign | 0.1837 | benign | -0.33 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
T/W | 0.7382 | likely_pathogenic | 0.77 | pathogenic | -0.66 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
T/Y | 0.392 | ambiguous | 0.4271 | ambiguous | -0.413 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.