Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20168 | 60727;60728;60729 | chr2:178591223;178591222;178591221 | chr2:179455950;179455949;179455948 |
N2AB | 18527 | 55804;55805;55806 | chr2:178591223;178591222;178591221 | chr2:179455950;179455949;179455948 |
N2A | 17600 | 53023;53024;53025 | chr2:178591223;178591222;178591221 | chr2:179455950;179455949;179455948 |
N2B | 11103 | 33532;33533;33534 | chr2:178591223;178591222;178591221 | chr2:179455950;179455949;179455948 |
Novex-1 | 11228 | 33907;33908;33909 | chr2:178591223;178591222;178591221 | chr2:179455950;179455949;179455948 |
Novex-2 | 11295 | 34108;34109;34110 | chr2:178591223;178591222;178591221 | chr2:179455950;179455949;179455948 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs2050126636 | None | 0.997 | D | 0.759 | 0.597 | 0.783601265864 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs2050126636 | None | 0.997 | D | 0.759 | 0.597 | 0.783601265864 | gnomAD-4.0.0 | 2.56356E-06 | None | None | None | None | N | None | 1.69256E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39415E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.928 | likely_pathogenic | 0.9519 | pathogenic | -1.887 | Destabilizing | 0.999 | D | 0.75 | deleterious | D | 0.623858122 | None | None | N |
V/C | 0.9877 | likely_pathogenic | 0.991 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -2.813 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.640482896 | None | None | N |
V/E | 0.997 | likely_pathogenic | 0.9979 | pathogenic | -2.749 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/F | 0.9709 | likely_pathogenic | 0.9814 | pathogenic | -1.371 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.639877483 | None | None | N |
V/G | 0.9769 | likely_pathogenic | 0.9851 | pathogenic | -2.236 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.640482896 | None | None | N |
V/H | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
V/I | 0.1183 | likely_benign | 0.139 | benign | -0.978 | Destabilizing | 0.997 | D | 0.727 | prob.delet. | N | 0.515625821 | None | None | N |
V/K | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | -1.58 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/L | 0.909 | likely_pathogenic | 0.9405 | pathogenic | -0.978 | Destabilizing | 0.997 | D | 0.759 | deleterious | D | 0.589569193 | None | None | N |
V/M | 0.9008 | likely_pathogenic | 0.9315 | pathogenic | -1.098 | Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
V/N | 0.9931 | likely_pathogenic | 0.9954 | pathogenic | -1.703 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
V/P | 0.9911 | likely_pathogenic | 0.9942 | pathogenic | -1.253 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/Q | 0.9971 | likely_pathogenic | 0.998 | pathogenic | -1.861 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9956 | likely_pathogenic | 0.9967 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/S | 0.9735 | likely_pathogenic | 0.9827 | pathogenic | -2.17 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/T | 0.9105 | likely_pathogenic | 0.9342 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
V/W | 0.9998 | likely_pathogenic | 0.9999 | pathogenic | -1.63 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
V/Y | 0.9981 | likely_pathogenic | 0.9988 | pathogenic | -1.331 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.