Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20176 | 60751;60752;60753 | chr2:178591199;178591198;178591197 | chr2:179455926;179455925;179455924 |
N2AB | 18535 | 55828;55829;55830 | chr2:178591199;178591198;178591197 | chr2:179455926;179455925;179455924 |
N2A | 17608 | 53047;53048;53049 | chr2:178591199;178591198;178591197 | chr2:179455926;179455925;179455924 |
N2B | 11111 | 33556;33557;33558 | chr2:178591199;178591198;178591197 | chr2:179455926;179455925;179455924 |
Novex-1 | 11236 | 33931;33932;33933 | chr2:178591199;178591198;178591197 | chr2:179455926;179455925;179455924 |
Novex-2 | 11303 | 34132;34133;34134 | chr2:178591199;178591198;178591197 | chr2:179455926;179455925;179455924 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.826 | N | 0.437 | 0.124 | 0.181679512989 | gnomAD-4.0.0 | 1.59199E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0783 | likely_benign | 0.0815 | benign | -0.665 | Destabilizing | 0.826 | D | 0.437 | neutral | N | 0.473274082 | None | None | N |
T/C | 0.3254 | likely_benign | 0.3062 | benign | -0.432 | Destabilizing | 0.999 | D | 0.568 | neutral | None | None | None | None | N |
T/D | 0.4129 | ambiguous | 0.4636 | ambiguous | -0.235 | Destabilizing | 0.997 | D | 0.605 | neutral | None | None | None | None | N |
T/E | 0.2403 | likely_benign | 0.2657 | benign | -0.201 | Destabilizing | 0.969 | D | 0.595 | neutral | None | None | None | None | N |
T/F | 0.2877 | likely_benign | 0.3156 | benign | -0.57 | Destabilizing | 0.982 | D | 0.649 | neutral | None | None | None | None | N |
T/G | 0.2326 | likely_benign | 0.242 | benign | -0.964 | Destabilizing | 0.969 | D | 0.583 | neutral | None | None | None | None | N |
T/H | 0.2999 | likely_benign | 0.3449 | ambiguous | -1.299 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | N |
T/I | 0.1239 | likely_benign | 0.1184 | benign | 0.049 | Stabilizing | 0.061 | N | 0.312 | neutral | N | 0.444105968 | None | None | N |
T/K | 0.169 | likely_benign | 0.1884 | benign | -0.795 | Destabilizing | 0.959 | D | 0.579 | neutral | N | 0.470599136 | None | None | N |
T/L | 0.0929 | likely_benign | 0.094 | benign | 0.049 | Stabilizing | 0.579 | D | 0.366 | neutral | None | None | None | None | N |
T/M | 0.0884 | likely_benign | 0.0886 | benign | 0.146 | Stabilizing | 0.579 | D | 0.368 | neutral | None | None | None | None | N |
T/N | 0.1629 | likely_benign | 0.1809 | benign | -0.78 | Destabilizing | 0.997 | D | 0.542 | neutral | None | None | None | None | N |
T/P | 0.3642 | ambiguous | 0.4524 | ambiguous | -0.155 | Destabilizing | 0.996 | D | 0.601 | neutral | N | 0.422711976 | None | None | N |
T/Q | 0.2032 | likely_benign | 0.2221 | benign | -0.816 | Destabilizing | 0.991 | D | 0.579 | neutral | None | None | None | None | N |
T/R | 0.1431 | likely_benign | 0.1722 | benign | -0.705 | Destabilizing | 0.988 | D | 0.593 | neutral | N | 0.4783919 | None | None | N |
T/S | 0.1178 | likely_benign | 0.1266 | benign | -1.008 | Destabilizing | 0.959 | D | 0.499 | neutral | N | 0.449109143 | None | None | N |
T/V | 0.0963 | likely_benign | 0.0847 | benign | -0.155 | Destabilizing | 0.079 | N | 0.24 | neutral | None | None | None | None | N |
T/W | 0.6493 | likely_pathogenic | 0.7074 | pathogenic | -0.595 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
T/Y | 0.336 | likely_benign | 0.3778 | ambiguous | -0.346 | Destabilizing | 0.997 | D | 0.638 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.