Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20179 | 60760;60761;60762 | chr2:178591190;178591189;178591188 | chr2:179455917;179455916;179455915 |
N2AB | 18538 | 55837;55838;55839 | chr2:178591190;178591189;178591188 | chr2:179455917;179455916;179455915 |
N2A | 17611 | 53056;53057;53058 | chr2:178591190;178591189;178591188 | chr2:179455917;179455916;179455915 |
N2B | 11114 | 33565;33566;33567 | chr2:178591190;178591189;178591188 | chr2:179455917;179455916;179455915 |
Novex-1 | 11239 | 33940;33941;33942 | chr2:178591190;178591189;178591188 | chr2:179455917;179455916;179455915 |
Novex-2 | 11306 | 34141;34142;34143 | chr2:178591190;178591189;178591188 | chr2:179455917;179455916;179455915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1370265685 | -1.232 | 0.021 | N | 0.216 | 0.071 | 0.378322506985 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/V | rs1370265685 | -1.232 | 0.021 | N | 0.216 | 0.071 | 0.378322506985 | gnomAD-4.0.0 | 1.77932E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.339E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8765 | likely_pathogenic | 0.9252 | pathogenic | -2.355 | Highly Destabilizing | 0.079 | N | 0.433 | neutral | None | None | None | None | N |
I/C | 0.9218 | likely_pathogenic | 0.9463 | pathogenic | -1.942 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/D | 0.9961 | likely_pathogenic | 0.9983 | pathogenic | -2.261 | Highly Destabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | N |
I/E | 0.9888 | likely_pathogenic | 0.9943 | pathogenic | -2.039 | Highly Destabilizing | 0.991 | D | 0.795 | deleterious | None | None | None | None | N |
I/F | 0.5902 | likely_pathogenic | 0.6931 | pathogenic | -1.354 | Destabilizing | 0.988 | D | 0.731 | prob.delet. | N | 0.516094644 | None | None | N |
I/G | 0.9838 | likely_pathogenic | 0.9931 | pathogenic | -2.904 | Highly Destabilizing | 0.939 | D | 0.772 | deleterious | None | None | None | None | N |
I/H | 0.9912 | likely_pathogenic | 0.9963 | pathogenic | -2.384 | Highly Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
I/K | 0.98 | likely_pathogenic | 0.9897 | pathogenic | -1.675 | Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
I/L | 0.1795 | likely_benign | 0.1911 | benign | -0.778 | Destabilizing | 0.509 | D | 0.531 | neutral | N | 0.424848204 | None | None | N |
I/M | 0.2067 | likely_benign | 0.2211 | benign | -0.973 | Destabilizing | 0.988 | D | 0.672 | neutral | N | 0.504936288 | None | None | N |
I/N | 0.9654 | likely_pathogenic | 0.9844 | pathogenic | -1.954 | Destabilizing | 0.996 | D | 0.806 | deleterious | N | 0.504414197 | None | None | N |
I/P | 0.9399 | likely_pathogenic | 0.9551 | pathogenic | -1.282 | Destabilizing | 0.997 | D | 0.803 | deleterious | None | None | None | None | N |
I/Q | 0.9801 | likely_pathogenic | 0.9899 | pathogenic | -1.798 | Destabilizing | 0.997 | D | 0.805 | deleterious | None | None | None | None | N |
I/R | 0.9739 | likely_pathogenic | 0.9878 | pathogenic | -1.525 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
I/S | 0.9531 | likely_pathogenic | 0.9769 | pathogenic | -2.735 | Highly Destabilizing | 0.852 | D | 0.738 | prob.delet. | N | 0.486221037 | None | None | N |
I/T | 0.9219 | likely_pathogenic | 0.9518 | pathogenic | -2.355 | Highly Destabilizing | 0.92 | D | 0.709 | prob.delet. | N | 0.514979924 | None | None | N |
I/V | 0.0809 | likely_benign | 0.0862 | benign | -1.282 | Destabilizing | 0.021 | N | 0.216 | neutral | N | 0.4238537 | None | None | N |
I/W | 0.9835 | likely_pathogenic | 0.9921 | pathogenic | -1.655 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
I/Y | 0.9604 | likely_pathogenic | 0.9798 | pathogenic | -1.368 | Destabilizing | 0.997 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.