Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20180 | 60763;60764;60765 | chr2:178591187;178591186;178591185 | chr2:179455914;179455913;179455912 |
N2AB | 18539 | 55840;55841;55842 | chr2:178591187;178591186;178591185 | chr2:179455914;179455913;179455912 |
N2A | 17612 | 53059;53060;53061 | chr2:178591187;178591186;178591185 | chr2:179455914;179455913;179455912 |
N2B | 11115 | 33568;33569;33570 | chr2:178591187;178591186;178591185 | chr2:179455914;179455913;179455912 |
Novex-1 | 11240 | 33943;33944;33945 | chr2:178591187;178591186;178591185 | chr2:179455914;179455913;179455912 |
Novex-2 | 11307 | 34144;34145;34146 | chr2:178591187;178591186;178591185 | chr2:179455914;179455913;179455912 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs1030296243 | -0.787 | 0.003 | N | 0.317 | 0.079 | 0.0611884634855 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/H | rs1030296243 | -0.787 | 0.003 | N | 0.317 | 0.079 | 0.0611884634855 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/H | rs1030296243 | -0.787 | 0.003 | N | 0.317 | 0.079 | 0.0611884634855 | gnomAD-4.0.0 | 3.71919E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39112E-06 | 2.19626E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1656 | likely_benign | 0.1858 | benign | -0.572 | Destabilizing | 0.575 | D | 0.641 | neutral | None | None | None | None | N |
N/C | 0.1808 | likely_benign | 0.2161 | benign | 0.151 | Stabilizing | 0.991 | D | 0.789 | deleterious | None | None | None | None | N |
N/D | 0.1138 | likely_benign | 0.1229 | benign | 0.245 | Stabilizing | 0.001 | N | 0.199 | neutral | N | 0.461876158 | None | None | N |
N/E | 0.2039 | likely_benign | 0.2376 | benign | 0.275 | Stabilizing | 0.404 | N | 0.501 | neutral | None | None | None | None | N |
N/F | 0.4393 | ambiguous | 0.5388 | ambiguous | -0.629 | Destabilizing | 0.906 | D | 0.783 | deleterious | None | None | None | None | N |
N/G | 0.2939 | likely_benign | 0.3519 | ambiguous | -0.828 | Destabilizing | 0.575 | D | 0.499 | neutral | None | None | None | None | N |
N/H | 0.0665 | likely_benign | 0.0814 | benign | -0.642 | Destabilizing | 0.003 | N | 0.317 | neutral | N | 0.502855988 | None | None | N |
N/I | 0.1425 | likely_benign | 0.1651 | benign | 0.039 | Stabilizing | 0.879 | D | 0.783 | deleterious | N | 0.489966836 | None | None | N |
N/K | 0.1599 | likely_benign | 0.196 | benign | 0.043 | Stabilizing | 0.505 | D | 0.509 | neutral | N | 0.420930825 | None | None | N |
N/L | 0.1583 | likely_benign | 0.1981 | benign | 0.039 | Stabilizing | 0.826 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/M | 0.2387 | likely_benign | 0.2622 | benign | 0.31 | Stabilizing | 0.991 | D | 0.731 | prob.delet. | None | None | None | None | N |
N/P | 0.721 | likely_pathogenic | 0.8643 | pathogenic | -0.135 | Destabilizing | 0.906 | D | 0.749 | deleterious | None | None | None | None | N |
N/Q | 0.1742 | likely_benign | 0.2096 | benign | -0.491 | Destabilizing | 0.826 | D | 0.569 | neutral | None | None | None | None | N |
N/R | 0.1724 | likely_benign | 0.2324 | benign | 0.04 | Stabilizing | 0.826 | D | 0.556 | neutral | None | None | None | None | N |
N/S | 0.0814 | likely_benign | 0.084 | benign | -0.458 | Destabilizing | 0.338 | N | 0.499 | neutral | N | 0.465297678 | None | None | N |
N/T | 0.0841 | likely_benign | 0.0884 | benign | -0.247 | Destabilizing | 0.505 | D | 0.511 | neutral | N | 0.456486194 | None | None | N |
N/V | 0.131 | likely_benign | 0.1493 | benign | -0.135 | Destabilizing | 0.906 | D | 0.766 | deleterious | None | None | None | None | N |
N/W | 0.6643 | likely_pathogenic | 0.7653 | pathogenic | -0.47 | Destabilizing | 0.991 | D | 0.756 | deleterious | None | None | None | None | N |
N/Y | 0.1299 | likely_benign | 0.1708 | benign | -0.242 | Destabilizing | 0.642 | D | 0.752 | deleterious | N | 0.473268115 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.