Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20185 | 60778;60779;60780 | chr2:178591172;178591171;178591170 | chr2:179455899;179455898;179455897 |
N2AB | 18544 | 55855;55856;55857 | chr2:178591172;178591171;178591170 | chr2:179455899;179455898;179455897 |
N2A | 17617 | 53074;53075;53076 | chr2:178591172;178591171;178591170 | chr2:179455899;179455898;179455897 |
N2B | 11120 | 33583;33584;33585 | chr2:178591172;178591171;178591170 | chr2:179455899;179455898;179455897 |
Novex-1 | 11245 | 33958;33959;33960 | chr2:178591172;178591171;178591170 | chr2:179455899;179455898;179455897 |
Novex-2 | 11312 | 34159;34160;34161 | chr2:178591172;178591171;178591170 | chr2:179455899;179455898;179455897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.991 | N | 0.462 | 0.424 | 0.427829143865 | gnomAD-4.0.0 | 2.40067E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62504E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2369 | likely_benign | 0.2717 | benign | -0.628 | Destabilizing | 0.76 | D | 0.452 | neutral | N | 0.484338614 | None | None | N |
T/C | 0.7158 | likely_pathogenic | 0.7341 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | N |
T/D | 0.5702 | likely_pathogenic | 0.5863 | pathogenic | -1.516 | Destabilizing | 0.986 | D | 0.434 | neutral | None | None | None | None | N |
T/E | 0.64 | likely_pathogenic | 0.6691 | pathogenic | -1.416 | Destabilizing | 0.953 | D | 0.431 | neutral | None | None | None | None | N |
T/F | 0.5155 | ambiguous | 0.5325 | ambiguous | -0.252 | Destabilizing | 0.993 | D | 0.543 | neutral | None | None | None | None | N |
T/G | 0.3605 | ambiguous | 0.3638 | ambiguous | -0.968 | Destabilizing | 0.91 | D | 0.465 | neutral | None | None | None | None | N |
T/H | 0.4907 | ambiguous | 0.4866 | ambiguous | -1.433 | Destabilizing | 0.252 | N | 0.387 | neutral | None | None | None | None | N |
T/I | 0.6288 | likely_pathogenic | 0.6495 | pathogenic | 0.234 | Stabilizing | 0.991 | D | 0.462 | neutral | N | 0.500089465 | None | None | N |
T/K | 0.4433 | ambiguous | 0.4388 | ambiguous | -1.028 | Destabilizing | 0.986 | D | 0.429 | neutral | None | None | None | None | N |
T/L | 0.2225 | likely_benign | 0.2294 | benign | 0.234 | Stabilizing | 0.953 | D | 0.435 | neutral | None | None | None | None | N |
T/M | 0.1661 | likely_benign | 0.1837 | benign | 0.436 | Stabilizing | 0.999 | D | 0.448 | neutral | None | None | None | None | N |
T/N | 0.2136 | likely_benign | 0.2228 | benign | -1.335 | Destabilizing | 0.939 | D | 0.427 | neutral | N | 0.47192867 | None | None | N |
T/P | 0.682 | likely_pathogenic | 0.7398 | pathogenic | -0.022 | Destabilizing | 0.991 | D | 0.461 | neutral | N | 0.514079117 | None | None | N |
T/Q | 0.4804 | ambiguous | 0.489 | ambiguous | -1.192 | Destabilizing | 0.986 | D | 0.466 | neutral | None | None | None | None | N |
T/R | 0.4552 | ambiguous | 0.4587 | ambiguous | -1.124 | Destabilizing | 0.986 | D | 0.463 | neutral | None | None | None | None | N |
T/S | 0.1415 | likely_benign | 0.1501 | benign | -1.321 | Destabilizing | 0.17 | N | 0.309 | neutral | N | 0.506629799 | None | None | N |
T/V | 0.5309 | ambiguous | 0.5416 | ambiguous | -0.022 | Destabilizing | 0.953 | D | 0.439 | neutral | None | None | None | None | N |
T/W | 0.8762 | likely_pathogenic | 0.8784 | pathogenic | -0.555 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
T/Y | 0.5869 | likely_pathogenic | 0.5858 | pathogenic | -0.25 | Destabilizing | 0.986 | D | 0.538 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.