Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20187 | 60784;60785;60786 | chr2:178591166;178591165;178591164 | chr2:179455893;179455892;179455891 |
N2AB | 18546 | 55861;55862;55863 | chr2:178591166;178591165;178591164 | chr2:179455893;179455892;179455891 |
N2A | 17619 | 53080;53081;53082 | chr2:178591166;178591165;178591164 | chr2:179455893;179455892;179455891 |
N2B | 11122 | 33589;33590;33591 | chr2:178591166;178591165;178591164 | chr2:179455893;179455892;179455891 |
Novex-1 | 11247 | 33964;33965;33966 | chr2:178591166;178591165;178591164 | chr2:179455893;179455892;179455891 |
Novex-2 | 11314 | 34165;34166;34167 | chr2:178591166;178591165;178591164 | chr2:179455893;179455892;179455891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs2154184823 | None | 0.722 | D | 0.517 | 0.259 | 0.251639045875 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2411 | likely_benign | 0.2434 | benign | -0.853 | Destabilizing | 0.722 | D | 0.506 | neutral | N | 0.496162089 | None | None | I |
E/C | 0.8903 | likely_pathogenic | 0.8896 | pathogenic | -0.492 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/D | 0.0984 | likely_benign | 0.107 | benign | -0.946 | Destabilizing | 0.001 | N | 0.097 | neutral | N | 0.38812776 | None | None | I |
E/F | 0.8257 | likely_pathogenic | 0.8171 | pathogenic | -0.497 | Destabilizing | 0.987 | D | 0.602 | neutral | None | None | None | None | I |
E/G | 0.2056 | likely_benign | 0.2179 | benign | -1.171 | Destabilizing | 0.722 | D | 0.488 | neutral | N | 0.495815373 | None | None | I |
E/H | 0.5353 | ambiguous | 0.535 | ambiguous | -0.787 | Destabilizing | 0.987 | D | 0.473 | neutral | None | None | None | None | I |
E/I | 0.5676 | likely_pathogenic | 0.555 | ambiguous | 0.005 | Stabilizing | 0.961 | D | 0.599 | neutral | None | None | None | None | I |
E/K | 0.2348 | likely_benign | 0.2256 | benign | -0.916 | Destabilizing | 0.722 | D | 0.551 | neutral | N | 0.500221115 | None | None | I |
E/L | 0.546 | ambiguous | 0.5299 | ambiguous | 0.005 | Stabilizing | 0.961 | D | 0.581 | neutral | None | None | None | None | I |
E/M | 0.6032 | likely_pathogenic | 0.5973 | pathogenic | 0.408 | Stabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | I |
E/N | 0.2588 | likely_benign | 0.2778 | benign | -1.127 | Destabilizing | 0.633 | D | 0.515 | neutral | None | None | None | None | I |
E/P | 0.9186 | likely_pathogenic | 0.9224 | pathogenic | -0.261 | Destabilizing | 0.961 | D | 0.486 | neutral | None | None | None | None | I |
E/Q | 0.1798 | likely_benign | 0.1747 | benign | -1.003 | Destabilizing | 0.722 | D | 0.517 | neutral | D | 0.523097975 | None | None | I |
E/R | 0.3575 | ambiguous | 0.3433 | ambiguous | -0.62 | Destabilizing | 0.961 | D | 0.503 | neutral | None | None | None | None | I |
E/S | 0.2223 | likely_benign | 0.233 | benign | -1.417 | Destabilizing | 0.633 | D | 0.504 | neutral | None | None | None | None | I |
E/T | 0.2603 | likely_benign | 0.2588 | benign | -1.175 | Destabilizing | 0.775 | D | 0.494 | neutral | None | None | None | None | I |
E/V | 0.3752 | ambiguous | 0.3655 | ambiguous | -0.261 | Destabilizing | 0.949 | D | 0.501 | neutral | N | 0.478775071 | None | None | I |
E/W | 0.899 | likely_pathogenic | 0.8988 | pathogenic | -0.345 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/Y | 0.6549 | likely_pathogenic | 0.6487 | pathogenic | -0.322 | Destabilizing | 0.987 | D | 0.57 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.