Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20188 | 60787;60788;60789 | chr2:178591163;178591162;178591161 | chr2:179455890;179455889;179455888 |
N2AB | 18547 | 55864;55865;55866 | chr2:178591163;178591162;178591161 | chr2:179455890;179455889;179455888 |
N2A | 17620 | 53083;53084;53085 | chr2:178591163;178591162;178591161 | chr2:179455890;179455889;179455888 |
N2B | 11123 | 33592;33593;33594 | chr2:178591163;178591162;178591161 | chr2:179455890;179455889;179455888 |
Novex-1 | 11248 | 33967;33968;33969 | chr2:178591163;178591162;178591161 | chr2:179455890;179455889;179455888 |
Novex-2 | 11315 | 34168;34169;34170 | chr2:178591163;178591162;178591161 | chr2:179455890;179455889;179455888 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.055 | N | 0.567 | 0.119 | 0.183819452728 | gnomAD-4.0.0 | 1.36877E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79927E-06 | 0 | 0 |
H/Y | None | None | None | N | 0.138 | 0.148 | 0.0716867268079 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2509 | likely_benign | 0.2451 | benign | -0.942 | Destabilizing | 0.016 | N | 0.424 | neutral | None | None | None | None | N |
H/C | 0.1223 | likely_benign | 0.126 | benign | -0.278 | Destabilizing | 0.864 | D | 0.699 | prob.neutral | None | None | None | None | N |
H/D | 0.2458 | likely_benign | 0.2542 | benign | -1.005 | Destabilizing | 0.055 | N | 0.573 | neutral | N | 0.500335758 | None | None | N |
H/E | 0.2891 | likely_benign | 0.2807 | benign | -0.897 | Destabilizing | 0.031 | N | 0.455 | neutral | None | None | None | None | N |
H/F | 0.169 | likely_benign | 0.1543 | benign | 0.355 | Stabilizing | 0.038 | N | 0.567 | neutral | None | None | None | None | N |
H/G | 0.3088 | likely_benign | 0.3032 | benign | -1.282 | Destabilizing | 0.031 | N | 0.459 | neutral | None | None | None | None | N |
H/I | 0.3279 | likely_benign | 0.3208 | benign | 0.01 | Stabilizing | 0.214 | N | 0.7 | prob.neutral | None | None | None | None | N |
H/K | 0.3139 | likely_benign | 0.3078 | benign | -0.875 | Destabilizing | 0.072 | N | 0.543 | neutral | None | None | None | None | N |
H/L | 0.1807 | likely_benign | 0.1726 | benign | 0.01 | Stabilizing | 0.029 | N | 0.561 | neutral | N | 0.501029192 | None | None | N |
H/M | 0.3535 | ambiguous | 0.3325 | benign | -0.154 | Destabilizing | 0.356 | N | 0.678 | prob.neutral | None | None | None | None | N |
H/N | 0.0898 | likely_benign | 0.0922 | benign | -0.961 | Destabilizing | 0.055 | N | 0.469 | neutral | N | 0.439999375 | None | None | N |
H/P | 0.9063 | likely_pathogenic | 0.9162 | pathogenic | -0.29 | Destabilizing | 0.295 | N | 0.681 | prob.neutral | N | 0.468797891 | None | None | N |
H/Q | 0.1885 | likely_benign | 0.1858 | benign | -0.647 | Destabilizing | 0.106 | N | 0.577 | neutral | N | 0.460219932 | None | None | N |
H/R | 0.1818 | likely_benign | 0.1801 | benign | -1.321 | Destabilizing | 0.055 | N | 0.567 | neutral | N | 0.433092046 | None | None | N |
H/S | 0.1617 | likely_benign | 0.1563 | benign | -0.959 | Destabilizing | 0.001 | N | 0.295 | neutral | None | None | None | None | N |
H/T | 0.1928 | likely_benign | 0.1835 | benign | -0.765 | Destabilizing | 0.038 | N | 0.522 | neutral | None | None | None | None | N |
H/V | 0.2588 | likely_benign | 0.2451 | benign | -0.29 | Destabilizing | 0.072 | N | 0.63 | neutral | None | None | None | None | N |
H/W | 0.3291 | likely_benign | 0.3009 | benign | 0.509 | Stabilizing | 0.676 | D | 0.667 | neutral | None | None | None | None | N |
H/Y | 0.0598 | likely_benign | 0.06 | benign | 0.607 | Stabilizing | None | N | 0.138 | neutral | N | 0.399864907 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.