Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20191 | 60796;60797;60798 | chr2:178591154;178591153;178591152 | chr2:179455881;179455880;179455879 |
N2AB | 18550 | 55873;55874;55875 | chr2:178591154;178591153;178591152 | chr2:179455881;179455880;179455879 |
N2A | 17623 | 53092;53093;53094 | chr2:178591154;178591153;178591152 | chr2:179455881;179455880;179455879 |
N2B | 11126 | 33601;33602;33603 | chr2:178591154;178591153;178591152 | chr2:179455881;179455880;179455879 |
Novex-1 | 11251 | 33976;33977;33978 | chr2:178591154;178591153;178591152 | chr2:179455881;179455880;179455879 |
Novex-2 | 11318 | 34177;34178;34179 | chr2:178591154;178591153;178591152 | chr2:179455881;179455880;179455879 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs745806239 | -1.039 | 0.993 | N | 0.359 | 0.366 | 0.416833835346 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23839E-04 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/L | rs745806239 | -1.039 | 0.993 | N | 0.359 | 0.366 | 0.416833835346 | gnomAD-4.0.0 | 6.84385E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.00959E-04 | None | 0 | 0 | 0 | 4.63865E-05 | 3.314E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9157 | likely_pathogenic | 0.9318 | pathogenic | -2.675 | Highly Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/C | 0.9464 | likely_pathogenic | 0.9526 | pathogenic | -1.626 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
I/D | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -3.349 | Highly Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
I/E | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -3.013 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
I/F | 0.5409 | ambiguous | 0.569 | pathogenic | -1.639 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.467000692 | None | None | N |
I/G | 0.9937 | likely_pathogenic | 0.9956 | pathogenic | -3.292 | Highly Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
I/H | 0.9974 | likely_pathogenic | 0.9981 | pathogenic | -3.077 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
I/K | 0.997 | likely_pathogenic | 0.9977 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.922 | deleterious | None | None | None | None | N |
I/L | 0.1656 | likely_benign | 0.1653 | benign | -0.81 | Destabilizing | 0.993 | D | 0.359 | neutral | N | 0.3660264 | None | None | N |
I/M | 0.3015 | likely_benign | 0.3258 | benign | -0.896 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | N | 0.471293106 | None | None | N |
I/N | 0.9941 | likely_pathogenic | 0.9964 | pathogenic | -2.784 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | N | 0.506287075 | None | None | N |
I/P | 0.9973 | likely_pathogenic | 0.9981 | pathogenic | -1.425 | Destabilizing | 1.0 | D | 0.93 | deleterious | None | None | None | None | N |
I/Q | 0.9969 | likely_pathogenic | 0.9977 | pathogenic | -2.378 | Highly Destabilizing | 1.0 | D | 0.94 | deleterious | None | None | None | None | N |
I/R | 0.9943 | likely_pathogenic | 0.9957 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
I/S | 0.9863 | likely_pathogenic | 0.9913 | pathogenic | -3.286 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | N | 0.506287075 | None | None | N |
I/T | 0.9716 | likely_pathogenic | 0.9817 | pathogenic | -2.781 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.506033585 | None | None | N |
I/V | 0.1016 | likely_benign | 0.1025 | benign | -1.425 | Destabilizing | 0.993 | D | 0.32 | neutral | N | 0.44314875 | None | None | N |
I/W | 0.9948 | likely_pathogenic | 0.9958 | pathogenic | -2.04 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
I/Y | 0.9717 | likely_pathogenic | 0.9758 | pathogenic | -1.824 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.