Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20211 | 60856;60857;60858 | chr2:178591094;178591093;178591092 | chr2:179455821;179455820;179455819 |
N2AB | 18570 | 55933;55934;55935 | chr2:178591094;178591093;178591092 | chr2:179455821;179455820;179455819 |
N2A | 17643 | 53152;53153;53154 | chr2:178591094;178591093;178591092 | chr2:179455821;179455820;179455819 |
N2B | 11146 | 33661;33662;33663 | chr2:178591094;178591093;178591092 | chr2:179455821;179455820;179455819 |
Novex-1 | 11271 | 34036;34037;34038 | chr2:178591094;178591093;178591092 | chr2:179455821;179455820;179455819 |
Novex-2 | 11338 | 34237;34238;34239 | chr2:178591094;178591093;178591092 | chr2:179455821;179455820;179455819 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs760080560 | -1.897 | 1.0 | N | 0.837 | 0.539 | 0.395595088485 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
K/T | rs760080560 | -1.897 | 1.0 | N | 0.837 | 0.539 | 0.395595088485 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85979E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9419 | likely_pathogenic | 0.9586 | pathogenic | -1.326 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
K/C | 0.8929 | likely_pathogenic | 0.9064 | pathogenic | -1.211 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/D | 0.9951 | likely_pathogenic | 0.9963 | pathogenic | -1.524 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
K/E | 0.8718 | likely_pathogenic | 0.916 | pathogenic | -1.214 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.515984312 | None | None | N |
K/F | 0.9539 | likely_pathogenic | 0.9665 | pathogenic | -0.697 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
K/G | 0.9623 | likely_pathogenic | 0.9715 | pathogenic | -1.803 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
K/H | 0.7621 | likely_pathogenic | 0.7986 | pathogenic | -1.404 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/I | 0.7974 | likely_pathogenic | 0.8325 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.873 | deleterious | N | 0.471658273 | None | None | N |
K/L | 0.7718 | likely_pathogenic | 0.8031 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
K/M | 0.5194 | ambiguous | 0.5832 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/N | 0.9722 | likely_pathogenic | 0.9803 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.865 | deleterious | N | 0.515984312 | None | None | N |
K/P | 0.998 | likely_pathogenic | 0.9986 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
K/Q | 0.4327 | ambiguous | 0.5242 | ambiguous | -1.14 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.478129961 | None | None | N |
K/R | 0.1395 | likely_benign | 0.1644 | benign | -0.398 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | N | 0.509187315 | None | None | N |
K/S | 0.9612 | likely_pathogenic | 0.9734 | pathogenic | -2.096 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
K/T | 0.8308 | likely_pathogenic | 0.8711 | pathogenic | -1.513 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.485256304 | None | None | N |
K/V | 0.7904 | likely_pathogenic | 0.8284 | pathogenic | -0.4 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
K/W | 0.9395 | likely_pathogenic | 0.9577 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
K/Y | 0.8526 | likely_pathogenic | 0.8809 | pathogenic | -0.325 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.