Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20228 | 60907;60908;60909 | chr2:178591043;178591042;178591041 | chr2:179455770;179455769;179455768 |
N2AB | 18587 | 55984;55985;55986 | chr2:178591043;178591042;178591041 | chr2:179455770;179455769;179455768 |
N2A | 17660 | 53203;53204;53205 | chr2:178591043;178591042;178591041 | chr2:179455770;179455769;179455768 |
N2B | 11163 | 33712;33713;33714 | chr2:178591043;178591042;178591041 | chr2:179455770;179455769;179455768 |
Novex-1 | 11288 | 34087;34088;34089 | chr2:178591043;178591042;178591041 | chr2:179455770;179455769;179455768 |
Novex-2 | 11355 | 34288;34289;34290 | chr2:178591043;178591042;178591041 | chr2:179455770;179455769;179455768 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.27 | N | 0.281 | 0.064 | 0.238705975628 | gnomAD-4.0.0 | 1.592E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2435 | likely_benign | 0.3166 | benign | -0.056 | Destabilizing | 0.004 | N | 0.192 | neutral | None | None | None | None | N |
K/C | 0.5662 | likely_pathogenic | 0.5969 | pathogenic | -0.469 | Destabilizing | 0.981 | D | 0.425 | neutral | None | None | None | None | N |
K/D | 0.4421 | ambiguous | 0.579 | pathogenic | 0.285 | Stabilizing | 0.495 | N | 0.364 | neutral | None | None | None | None | N |
K/E | 0.1679 | likely_benign | 0.2458 | benign | 0.316 | Stabilizing | 0.27 | N | 0.209 | neutral | N | 0.438977868 | None | None | N |
K/F | 0.6988 | likely_pathogenic | 0.7654 | pathogenic | -0.272 | Destabilizing | 0.944 | D | 0.506 | neutral | None | None | None | None | N |
K/G | 0.3204 | likely_benign | 0.4154 | ambiguous | -0.244 | Destabilizing | 0.003 | N | 0.249 | neutral | None | None | None | None | N |
K/H | 0.2534 | likely_benign | 0.2946 | benign | -0.357 | Destabilizing | 0.007 | N | 0.237 | neutral | None | None | None | None | N |
K/I | 0.3428 | ambiguous | 0.4093 | ambiguous | 0.362 | Stabilizing | 0.828 | D | 0.539 | neutral | None | None | None | None | N |
K/L | 0.3191 | likely_benign | 0.3887 | ambiguous | 0.362 | Stabilizing | 0.495 | N | 0.368 | neutral | None | None | None | None | N |
K/M | 0.2182 | likely_benign | 0.282 | benign | -0.042 | Destabilizing | 0.927 | D | 0.413 | neutral | N | 0.477586983 | None | None | N |
K/N | 0.3319 | likely_benign | 0.4464 | ambiguous | 0.027 | Stabilizing | 0.425 | N | 0.247 | neutral | N | 0.458779924 | None | None | N |
K/P | 0.6522 | likely_pathogenic | 0.7567 | pathogenic | 0.249 | Stabilizing | 0.828 | D | 0.449 | neutral | None | None | None | None | N |
K/Q | 0.1203 | likely_benign | 0.1425 | benign | -0.033 | Destabilizing | 0.023 | N | 0.123 | neutral | N | 0.463126951 | None | None | N |
K/R | 0.0785 | likely_benign | 0.0821 | benign | -0.014 | Destabilizing | 0.27 | N | 0.281 | neutral | N | 0.404484079 | None | None | N |
K/S | 0.2967 | likely_benign | 0.3962 | ambiguous | -0.474 | Destabilizing | 0.013 | N | 0.079 | neutral | None | None | None | None | N |
K/T | 0.1426 | likely_benign | 0.196 | benign | -0.286 | Destabilizing | 0.27 | N | 0.339 | neutral | N | 0.440439306 | None | None | N |
K/V | 0.2761 | likely_benign | 0.3349 | benign | 0.249 | Stabilizing | 0.495 | N | 0.4 | neutral | None | None | None | None | N |
K/W | 0.7102 | likely_pathogenic | 0.7668 | pathogenic | -0.327 | Destabilizing | 0.995 | D | 0.431 | neutral | None | None | None | None | N |
K/Y | 0.5546 | ambiguous | 0.6259 | pathogenic | 0.037 | Stabilizing | 0.704 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.