Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20229 | 60910;60911;60912 | chr2:178591040;178591039;178591038 | chr2:179455767;179455766;179455765 |
N2AB | 18588 | 55987;55988;55989 | chr2:178591040;178591039;178591038 | chr2:179455767;179455766;179455765 |
N2A | 17661 | 53206;53207;53208 | chr2:178591040;178591039;178591038 | chr2:179455767;179455766;179455765 |
N2B | 11164 | 33715;33716;33717 | chr2:178591040;178591039;178591038 | chr2:179455767;179455766;179455765 |
Novex-1 | 11289 | 34090;34091;34092 | chr2:178591040;178591039;178591038 | chr2:179455767;179455766;179455765 |
Novex-2 | 11356 | 34291;34292;34293 | chr2:178591040;178591039;178591038 | chr2:179455767;179455766;179455765 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs747588848 | None | 0.055 | N | 0.439 | 0.187 | 0.20549828249 | gnomAD-4.0.0 | 2.73735E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52169E-05 | None | 0 | 0 | 2.69885E-06 | 0 | 0 |
T/I | None | None | 0.124 | N | 0.512 | 0.166 | 0.259761712551 | gnomAD-4.0.0 | 1.59205E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1097 | likely_benign | 0.1274 | benign | -0.861 | Destabilizing | 0.055 | N | 0.439 | neutral | N | 0.486132131 | None | None | N |
T/C | 0.2532 | likely_benign | 0.2672 | benign | -0.35 | Destabilizing | 0.968 | D | 0.647 | neutral | None | None | None | None | N |
T/D | 0.5113 | ambiguous | 0.6175 | pathogenic | -0.166 | Destabilizing | 0.726 | D | 0.627 | neutral | None | None | None | None | N |
T/E | 0.3356 | likely_benign | 0.4333 | ambiguous | -0.031 | Destabilizing | 0.726 | D | 0.585 | neutral | None | None | None | None | N |
T/F | 0.3752 | ambiguous | 0.4691 | ambiguous | -0.753 | Destabilizing | 0.396 | N | 0.695 | prob.neutral | None | None | None | None | N |
T/G | 0.2383 | likely_benign | 0.2769 | benign | -1.218 | Destabilizing | 0.567 | D | 0.635 | neutral | None | None | None | None | N |
T/H | 0.3035 | likely_benign | 0.3683 | ambiguous | -1.219 | Destabilizing | 0.968 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/I | 0.2408 | likely_benign | 0.3024 | benign | 0.044 | Stabilizing | 0.124 | N | 0.512 | neutral | N | 0.488841156 | None | None | N |
T/K | 0.1888 | likely_benign | 0.2504 | benign | -0.12 | Destabilizing | 0.497 | N | 0.586 | neutral | N | 0.486132131 | None | None | N |
T/L | 0.0648 | likely_benign | 0.077 | benign | 0.044 | Stabilizing | 0.001 | N | 0.342 | neutral | None | None | None | None | N |
T/M | 0.0766 | likely_benign | 0.0854 | benign | -0.004 | Destabilizing | 0.026 | N | 0.393 | neutral | None | None | None | None | N |
T/N | 0.1212 | likely_benign | 0.1381 | benign | -0.527 | Destabilizing | 0.726 | D | 0.512 | neutral | None | None | None | None | N |
T/P | 0.0839 | likely_benign | 0.1083 | benign | -0.226 | Destabilizing | 0.859 | D | 0.633 | neutral | N | 0.498202317 | None | None | N |
T/Q | 0.1917 | likely_benign | 0.2215 | benign | -0.401 | Destabilizing | 0.567 | D | 0.647 | neutral | None | None | None | None | N |
T/R | 0.1568 | likely_benign | 0.2058 | benign | -0.19 | Destabilizing | 0.497 | N | 0.63 | neutral | N | 0.475394483 | None | None | N |
T/S | 0.1611 | likely_benign | 0.1907 | benign | -0.889 | Destabilizing | 0.22 | N | 0.422 | neutral | N | 0.486688336 | None | None | N |
T/V | 0.1711 | likely_benign | 0.1964 | benign | -0.226 | Destabilizing | 0.157 | N | 0.439 | neutral | None | None | None | None | N |
T/W | 0.6451 | likely_pathogenic | 0.7468 | pathogenic | -0.81 | Destabilizing | 0.968 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/Y | 0.3445 | ambiguous | 0.4228 | ambiguous | -0.445 | Destabilizing | 0.726 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.