Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20233 | 60922;60923;60924 | chr2:178591028;178591027;178591026 | chr2:179455755;179455754;179455753 |
N2AB | 18592 | 55999;56000;56001 | chr2:178591028;178591027;178591026 | chr2:179455755;179455754;179455753 |
N2A | 17665 | 53218;53219;53220 | chr2:178591028;178591027;178591026 | chr2:179455755;179455754;179455753 |
N2B | 11168 | 33727;33728;33729 | chr2:178591028;178591027;178591026 | chr2:179455755;179455754;179455753 |
Novex-1 | 11293 | 34102;34103;34104 | chr2:178591028;178591027;178591026 | chr2:179455755;179455754;179455753 |
Novex-2 | 11360 | 34303;34304;34305 | chr2:178591028;178591027;178591026 | chr2:179455755;179455754;179455753 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1434582972 | -1.669 | 0.001 | N | 0.205 | 0.087 | 0.284539287134 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
I/V | rs1434582972 | -1.669 | 0.001 | N | 0.205 | 0.087 | 0.284539287134 | gnomAD-4.0.0 | 3.18377E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71935E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8523 | likely_pathogenic | 0.8791 | pathogenic | -2.598 | Highly Destabilizing | 0.25 | N | 0.738 | prob.delet. | None | None | None | None | N |
I/C | 0.8673 | likely_pathogenic | 0.8907 | pathogenic | -1.862 | Destabilizing | 0.947 | D | 0.766 | deleterious | None | None | None | None | N |
I/D | 0.9908 | likely_pathogenic | 0.9945 | pathogenic | -3.524 | Highly Destabilizing | 0.826 | D | 0.853 | deleterious | None | None | None | None | N |
I/E | 0.9851 | likely_pathogenic | 0.9903 | pathogenic | -3.249 | Highly Destabilizing | 0.826 | D | 0.856 | deleterious | None | None | None | None | N |
I/F | 0.4642 | ambiguous | 0.5047 | ambiguous | -1.661 | Destabilizing | 0.638 | D | 0.753 | deleterious | N | 0.509688747 | None | None | N |
I/G | 0.9748 | likely_pathogenic | 0.9825 | pathogenic | -3.157 | Highly Destabilizing | 0.826 | D | 0.85 | deleterious | None | None | None | None | N |
I/H | 0.9654 | likely_pathogenic | 0.9763 | pathogenic | -2.783 | Highly Destabilizing | 0.982 | D | 0.842 | deleterious | None | None | None | None | N |
I/K | 0.9772 | likely_pathogenic | 0.9846 | pathogenic | -2.342 | Highly Destabilizing | 0.826 | D | 0.855 | deleterious | None | None | None | None | N |
I/L | 0.2748 | likely_benign | 0.2758 | benign | -0.948 | Destabilizing | 0.043 | N | 0.408 | neutral | N | 0.472781011 | None | None | N |
I/M | 0.3183 | likely_benign | 0.3355 | benign | -0.845 | Destabilizing | 0.638 | D | 0.721 | prob.delet. | N | 0.473209344 | None | None | N |
I/N | 0.8618 | likely_pathogenic | 0.9076 | pathogenic | -2.918 | Highly Destabilizing | 0.916 | D | 0.854 | deleterious | N | 0.491655994 | None | None | N |
I/P | 0.9776 | likely_pathogenic | 0.9851 | pathogenic | -1.485 | Destabilizing | 0.935 | D | 0.853 | deleterious | None | None | None | None | N |
I/Q | 0.9712 | likely_pathogenic | 0.9793 | pathogenic | -2.696 | Highly Destabilizing | 0.935 | D | 0.869 | deleterious | None | None | None | None | N |
I/R | 0.9663 | likely_pathogenic | 0.977 | pathogenic | -2.135 | Highly Destabilizing | 0.826 | D | 0.861 | deleterious | None | None | None | None | N |
I/S | 0.8597 | likely_pathogenic | 0.9026 | pathogenic | -3.474 | Highly Destabilizing | 0.638 | D | 0.819 | deleterious | N | 0.491149015 | None | None | N |
I/T | 0.8587 | likely_pathogenic | 0.8874 | pathogenic | -3.05 | Highly Destabilizing | 0.201 | N | 0.763 | deleterious | N | 0.470829488 | None | None | N |
I/V | 0.0883 | likely_benign | 0.0897 | benign | -1.485 | Destabilizing | 0.001 | N | 0.205 | neutral | N | 0.364653468 | None | None | N |
I/W | 0.9836 | likely_pathogenic | 0.9878 | pathogenic | -2.165 | Highly Destabilizing | 0.982 | D | 0.818 | deleterious | None | None | None | None | N |
I/Y | 0.8952 | likely_pathogenic | 0.9222 | pathogenic | -1.83 | Destabilizing | 0.826 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.