Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20237 | 60934;60935;60936 | chr2:178591016;178591015;178591014 | chr2:179455743;179455742;179455741 |
N2AB | 18596 | 56011;56012;56013 | chr2:178591016;178591015;178591014 | chr2:179455743;179455742;179455741 |
N2A | 17669 | 53230;53231;53232 | chr2:178591016;178591015;178591014 | chr2:179455743;179455742;179455741 |
N2B | 11172 | 33739;33740;33741 | chr2:178591016;178591015;178591014 | chr2:179455743;179455742;179455741 |
Novex-1 | 11297 | 34114;34115;34116 | chr2:178591016;178591015;178591014 | chr2:179455743;179455742;179455741 |
Novex-2 | 11364 | 34315;34316;34317 | chr2:178591016;178591015;178591014 | chr2:179455743;179455742;179455741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.549 | N | 0.447 | 0.166 | 0.148003135375 | gnomAD-4.0.0 | 1.5919E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.333 | likely_benign | 0.3115 | benign | -0.442 | Destabilizing | 0.4 | N | 0.421 | neutral | None | None | None | None | N |
Q/C | 0.7484 | likely_pathogenic | 0.6951 | pathogenic | 0.04 | Stabilizing | 0.992 | D | 0.435 | neutral | None | None | None | None | N |
Q/D | 0.6354 | likely_pathogenic | 0.6273 | pathogenic | 0.122 | Stabilizing | 0.617 | D | 0.414 | neutral | None | None | None | None | N |
Q/E | 0.0982 | likely_benign | 0.1049 | benign | 0.139 | Stabilizing | 0.334 | N | 0.391 | neutral | N | 0.423317769 | None | None | N |
Q/F | 0.7916 | likely_pathogenic | 0.763 | pathogenic | -0.504 | Destabilizing | 0.85 | D | 0.426 | neutral | None | None | None | None | N |
Q/G | 0.4288 | ambiguous | 0.4262 | ambiguous | -0.679 | Destabilizing | 0.617 | D | 0.454 | neutral | None | None | None | None | N |
Q/H | 0.3289 | likely_benign | 0.295 | benign | -0.401 | Destabilizing | 0.009 | N | 0.245 | neutral | N | 0.467303407 | None | None | N |
Q/I | 0.3854 | ambiguous | 0.3525 | ambiguous | 0.11 | Stabilizing | 0.447 | N | 0.411 | neutral | None | None | None | None | N |
Q/K | 0.1153 | likely_benign | 0.1118 | benign | 0.023 | Stabilizing | 0.549 | D | 0.411 | neutral | N | 0.445405195 | None | None | N |
Q/L | 0.1534 | likely_benign | 0.1396 | benign | 0.11 | Stabilizing | 0.379 | N | 0.428 | neutral | N | 0.467706052 | None | None | N |
Q/M | 0.4123 | ambiguous | 0.3688 | ambiguous | 0.318 | Stabilizing | 0.92 | D | 0.389 | neutral | None | None | None | None | N |
Q/N | 0.4788 | ambiguous | 0.4574 | ambiguous | -0.433 | Destabilizing | 0.447 | N | 0.399 | neutral | None | None | None | None | N |
Q/P | 0.4005 | ambiguous | 0.4171 | ambiguous | -0.044 | Destabilizing | 0.963 | D | 0.409 | neutral | N | 0.47214248 | None | None | N |
Q/R | 0.1255 | likely_benign | 0.1227 | benign | 0.185 | Stabilizing | 0.549 | D | 0.447 | neutral | N | 0.47682418 | None | None | N |
Q/S | 0.3968 | ambiguous | 0.3753 | ambiguous | -0.481 | Destabilizing | 0.617 | D | 0.377 | neutral | None | None | None | None | N |
Q/T | 0.2802 | likely_benign | 0.2628 | benign | -0.283 | Destabilizing | 0.617 | D | 0.445 | neutral | None | None | None | None | N |
Q/V | 0.2407 | likely_benign | 0.2153 | benign | -0.044 | Destabilizing | 0.021 | N | 0.287 | neutral | None | None | None | None | N |
Q/W | 0.6466 | likely_pathogenic | 0.6384 | pathogenic | -0.42 | Destabilizing | 0.992 | D | 0.477 | neutral | None | None | None | None | N |
Q/Y | 0.6067 | likely_pathogenic | 0.5691 | pathogenic | -0.183 | Destabilizing | 0.739 | D | 0.405 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.