Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20256 | 60991;60992;60993 | chr2:178590959;178590958;178590957 | chr2:179455686;179455685;179455684 |
N2AB | 18615 | 56068;56069;56070 | chr2:178590959;178590958;178590957 | chr2:179455686;179455685;179455684 |
N2A | 17688 | 53287;53288;53289 | chr2:178590959;178590958;178590957 | chr2:179455686;179455685;179455684 |
N2B | 11191 | 33796;33797;33798 | chr2:178590959;178590958;178590957 | chr2:179455686;179455685;179455684 |
Novex-1 | 11316 | 34171;34172;34173 | chr2:178590959;178590958;178590957 | chr2:179455686;179455685;179455684 |
Novex-2 | 11383 | 34372;34373;34374 | chr2:178590959;178590958;178590957 | chr2:179455686;179455685;179455684 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1314557712 | None | 0.101 | N | 0.513 | 0.21 | 0.490701487448 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1314557712 | None | 0.101 | N | 0.513 | 0.21 | 0.490701487448 | gnomAD-4.0.0 | 6.57843E-06 | None | None | None | None | N | None | 2.41429E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0744 | likely_benign | 0.0815 | benign | -1.333 | Destabilizing | None | N | 0.201 | neutral | N | 0.432441472 | None | None | N |
P/C | 0.4253 | ambiguous | 0.4509 | ambiguous | -0.779 | Destabilizing | 0.951 | D | 0.607 | neutral | None | None | None | None | N |
P/D | 0.2912 | likely_benign | 0.3374 | benign | -1.218 | Destabilizing | 0.129 | N | 0.489 | neutral | None | None | None | None | N |
P/E | 0.1735 | likely_benign | 0.2053 | benign | -1.263 | Destabilizing | 0.004 | N | 0.227 | neutral | None | None | None | None | N |
P/F | 0.3404 | ambiguous | 0.3861 | ambiguous | -1.088 | Destabilizing | 0.836 | D | 0.617 | neutral | None | None | None | None | N |
P/G | 0.2936 | likely_benign | 0.3214 | benign | -1.595 | Destabilizing | 0.001 | N | 0.289 | neutral | None | None | None | None | N |
P/H | 0.1677 | likely_benign | 0.2022 | benign | -1.082 | Destabilizing | 0.921 | D | 0.619 | neutral | N | 0.514019918 | None | None | N |
P/I | 0.1928 | likely_benign | 0.2129 | benign | -0.732 | Destabilizing | 0.418 | N | 0.691 | prob.neutral | None | None | None | None | N |
P/K | 0.1716 | likely_benign | 0.203 | benign | -1.17 | Destabilizing | 0.001 | N | 0.227 | neutral | None | None | None | None | N |
P/L | 0.0859 | likely_benign | 0.0982 | benign | -0.732 | Destabilizing | 0.101 | N | 0.513 | neutral | N | 0.477021755 | None | None | N |
P/M | 0.194 | likely_benign | 0.2054 | benign | -0.517 | Destabilizing | 0.94 | D | 0.621 | neutral | None | None | None | None | N |
P/N | 0.2464 | likely_benign | 0.2737 | benign | -0.858 | Destabilizing | 0.418 | N | 0.637 | neutral | None | None | None | None | N |
P/Q | 0.1162 | likely_benign | 0.1342 | benign | -1.101 | Destabilizing | 0.418 | N | 0.581 | neutral | None | None | None | None | N |
P/R | 0.159 | likely_benign | 0.1922 | benign | -0.544 | Destabilizing | 0.213 | N | 0.617 | neutral | N | 0.476154964 | None | None | N |
P/S | 0.1157 | likely_benign | 0.1345 | benign | -1.295 | Destabilizing | 0.101 | N | 0.448 | neutral | N | 0.47650168 | None | None | N |
P/T | 0.1001 | likely_benign | 0.1147 | benign | -1.246 | Destabilizing | 0.183 | N | 0.483 | neutral | N | 0.490238982 | None | None | N |
P/V | 0.1411 | likely_benign | 0.1558 | benign | -0.898 | Destabilizing | 0.129 | N | 0.503 | neutral | None | None | None | None | N |
P/W | 0.5676 | likely_pathogenic | 0.6303 | pathogenic | -1.216 | Destabilizing | 0.983 | D | 0.63 | neutral | None | None | None | None | N |
P/Y | 0.3203 | likely_benign | 0.3657 | ambiguous | -0.969 | Destabilizing | 0.94 | D | 0.618 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.