Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20259 | 61000;61001;61002 | chr2:178590950;178590949;178590948 | chr2:179455677;179455676;179455675 |
N2AB | 18618 | 56077;56078;56079 | chr2:178590950;178590949;178590948 | chr2:179455677;179455676;179455675 |
N2A | 17691 | 53296;53297;53298 | chr2:178590950;178590949;178590948 | chr2:179455677;179455676;179455675 |
N2B | 11194 | 33805;33806;33807 | chr2:178590950;178590949;178590948 | chr2:179455677;179455676;179455675 |
Novex-1 | 11319 | 34180;34181;34182 | chr2:178590950;178590949;178590948 | chr2:179455677;179455676;179455675 |
Novex-2 | 11386 | 34381;34382;34383 | chr2:178590950;178590949;178590948 | chr2:179455677;179455676;179455675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.958 | N | 0.669 | 0.247 | 0.302793454619 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8601E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1374 | likely_benign | 0.1566 | benign | -0.308 | Destabilizing | 0.919 | D | 0.669 | prob.neutral | N | 0.449611441 | None | None | N |
D/C | 0.498 | ambiguous | 0.5237 | ambiguous | -0.132 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
D/E | 0.1268 | likely_benign | 0.1357 | benign | -0.508 | Destabilizing | 0.06 | N | 0.196 | neutral | N | 0.332090837 | None | None | N |
D/F | 0.419 | ambiguous | 0.4673 | ambiguous | 0.407 | Stabilizing | 0.991 | D | 0.81 | deleterious | None | None | None | None | N |
D/G | 0.2153 | likely_benign | 0.2816 | benign | -0.695 | Destabilizing | 0.958 | D | 0.682 | prob.neutral | N | 0.462426023 | None | None | N |
D/H | 0.2215 | likely_benign | 0.2627 | benign | 0.251 | Stabilizing | 0.999 | D | 0.705 | prob.delet. | N | 0.496365238 | None | None | N |
D/I | 0.1606 | likely_benign | 0.1642 | benign | 0.725 | Stabilizing | 0.319 | N | 0.522 | neutral | None | None | None | None | N |
D/K | 0.2614 | likely_benign | 0.3168 | benign | -0.113 | Destabilizing | 0.938 | D | 0.701 | prob.delet. | None | None | None | None | N |
D/L | 0.1796 | likely_benign | 0.1964 | benign | 0.725 | Stabilizing | 0.883 | D | 0.657 | prob.neutral | None | None | None | None | N |
D/M | 0.4178 | ambiguous | 0.4288 | ambiguous | 1.018 | Stabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | N |
D/N | 0.1019 | likely_benign | 0.104 | benign | -0.8 | Destabilizing | 0.958 | D | 0.669 | prob.neutral | N | 0.477163402 | None | None | N |
D/P | 0.4764 | ambiguous | 0.5776 | pathogenic | 0.407 | Stabilizing | 0.997 | D | 0.71 | prob.delet. | None | None | None | None | N |
D/Q | 0.2484 | likely_benign | 0.2811 | benign | -0.602 | Destabilizing | 0.981 | D | 0.61 | neutral | None | None | None | None | N |
D/R | 0.3292 | likely_benign | 0.3952 | ambiguous | 0.142 | Stabilizing | 0.981 | D | 0.777 | deleterious | None | None | None | None | N |
D/S | 0.1214 | likely_benign | 0.1266 | benign | -1.025 | Destabilizing | 0.938 | D | 0.527 | neutral | None | None | None | None | N |
D/T | 0.152 | likely_benign | 0.1533 | benign | -0.69 | Destabilizing | 0.968 | D | 0.703 | prob.delet. | None | None | None | None | N |
D/V | 0.0986 | likely_benign | 0.1018 | benign | 0.407 | Stabilizing | 0.851 | D | 0.665 | prob.neutral | N | 0.452478388 | None | None | N |
D/W | 0.8235 | likely_pathogenic | 0.8535 | pathogenic | 0.646 | Stabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
D/Y | 0.1584 | likely_benign | 0.1877 | benign | 0.688 | Stabilizing | 0.996 | D | 0.819 | deleterious | N | 0.504080644 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.