Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20266 | 61021;61022;61023 | chr2:178590929;178590928;178590927 | chr2:179455656;179455655;179455654 |
N2AB | 18625 | 56098;56099;56100 | chr2:178590929;178590928;178590927 | chr2:179455656;179455655;179455654 |
N2A | 17698 | 53317;53318;53319 | chr2:178590929;178590928;178590927 | chr2:179455656;179455655;179455654 |
N2B | 11201 | 33826;33827;33828 | chr2:178590929;178590928;178590927 | chr2:179455656;179455655;179455654 |
Novex-1 | 11326 | 34201;34202;34203 | chr2:178590929;178590928;178590927 | chr2:179455656;179455655;179455654 |
Novex-2 | 11393 | 34402;34403;34404 | chr2:178590929;178590928;178590927 | chr2:179455656;179455655;179455654 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs763212024 | -1.98 | 0.06 | N | 0.143 | 0.142 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 1.29282E-04 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs763212024 | -1.98 | 0.06 | N | 0.143 | 0.142 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs763212024 | -1.98 | 0.06 | N | 0.143 | 0.142 | None | gnomAD-4.0.0 | 6.81953E-06 | None | None | None | None | N | None | 1.06846E-04 | 3.33578E-05 | None | 0 | 0 | None | 0 | 0 | 8.47923E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.311 | likely_benign | 0.2964 | benign | -0.192 | Destabilizing | 0.938 | D | 0.643 | neutral | None | None | None | None | N |
K/C | 0.4931 | ambiguous | 0.4758 | ambiguous | -0.337 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
K/D | 0.6769 | likely_pathogenic | 0.651 | pathogenic | -0.015 | Destabilizing | 0.883 | D | 0.666 | prob.neutral | None | None | None | None | N |
K/E | 0.1488 | likely_benign | 0.1496 | benign | 0.068 | Stabilizing | 0.06 | N | 0.143 | neutral | N | 0.507741733 | None | None | N |
K/F | 0.7323 | likely_pathogenic | 0.6924 | pathogenic | 0.03 | Stabilizing | 0.997 | D | 0.775 | deleterious | None | None | None | None | N |
K/G | 0.4952 | ambiguous | 0.4875 | ambiguous | -0.503 | Destabilizing | 0.968 | D | 0.663 | prob.neutral | None | None | None | None | N |
K/H | 0.3096 | likely_benign | 0.2854 | benign | -0.708 | Destabilizing | 0.997 | D | 0.674 | prob.neutral | None | None | None | None | N |
K/I | 0.275 | likely_benign | 0.257 | benign | 0.586 | Stabilizing | 0.997 | D | 0.786 | deleterious | None | None | None | None | N |
K/L | 0.3163 | likely_benign | 0.304 | benign | 0.586 | Stabilizing | 0.938 | D | 0.667 | prob.neutral | None | None | None | None | N |
K/M | 0.183 | likely_benign | 0.1754 | benign | 0.169 | Stabilizing | 0.999 | D | 0.672 | prob.neutral | N | 0.48131583 | None | None | N |
K/N | 0.4835 | ambiguous | 0.4624 | ambiguous | -0.132 | Destabilizing | 0.958 | D | 0.66 | prob.neutral | N | 0.492925625 | None | None | N |
K/P | 0.9373 | likely_pathogenic | 0.9348 | pathogenic | 0.356 | Stabilizing | 0.997 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/Q | 0.1007 | likely_benign | 0.0978 | benign | -0.168 | Destabilizing | 0.919 | D | 0.637 | neutral | N | 0.509299171 | None | None | N |
K/R | 0.078 | likely_benign | 0.0792 | benign | -0.32 | Destabilizing | 0.034 | N | 0.279 | neutral | N | 0.466180325 | None | None | N |
K/S | 0.3705 | ambiguous | 0.346 | ambiguous | -0.634 | Destabilizing | 0.938 | D | 0.583 | neutral | None | None | None | None | N |
K/T | 0.1494 | likely_benign | 0.1402 | benign | -0.366 | Destabilizing | 0.958 | D | 0.685 | prob.delet. | N | 0.516646431 | None | None | N |
K/V | 0.2123 | likely_benign | 0.198 | benign | 0.356 | Stabilizing | 0.991 | D | 0.659 | prob.neutral | None | None | None | None | N |
K/W | 0.7524 | likely_pathogenic | 0.7211 | pathogenic | 0.049 | Stabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
K/Y | 0.6159 | likely_pathogenic | 0.5927 | pathogenic | 0.339 | Stabilizing | 0.997 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.