Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20267 | 61024;61025;61026 | chr2:178590926;178590925;178590924 | chr2:179455653;179455652;179455651 |
N2AB | 18626 | 56101;56102;56103 | chr2:178590926;178590925;178590924 | chr2:179455653;179455652;179455651 |
N2A | 17699 | 53320;53321;53322 | chr2:178590926;178590925;178590924 | chr2:179455653;179455652;179455651 |
N2B | 11202 | 33829;33830;33831 | chr2:178590926;178590925;178590924 | chr2:179455653;179455652;179455651 |
Novex-1 | 11327 | 34204;34205;34206 | chr2:178590926;178590925;178590924 | chr2:179455653;179455652;179455651 |
Novex-2 | 11394 | 34405;34406;34407 | chr2:178590926;178590925;178590924 | chr2:179455653;179455652;179455651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs2050075865 | None | 0.93 | N | 0.36 | 0.218 | 0.292787519742 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs2050075865 | None | 0.93 | N | 0.36 | 0.218 | 0.292787519742 | gnomAD-4.0.0 | 1.31508E-05 | None | None | None | None | N | None | 4.82649E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | None | None | 0.006 | N | 0.252 | 0.172 | 0.198526703765 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.6616 | likely_pathogenic | 0.6789 | pathogenic | 0.48 | Stabilizing | 0.008 | N | 0.471 | neutral | None | None | None | None | N |
H/C | 0.4066 | ambiguous | 0.4405 | ambiguous | 0.729 | Stabilizing | 0.985 | D | 0.615 | neutral | None | None | None | None | N |
H/D | 0.4435 | ambiguous | 0.4646 | ambiguous | -0.184 | Destabilizing | 0.93 | D | 0.429 | neutral | N | 0.444132972 | None | None | N |
H/E | 0.616 | likely_pathogenic | 0.6385 | pathogenic | -0.162 | Destabilizing | 0.712 | D | 0.388 | neutral | None | None | None | None | N |
H/F | 0.4753 | ambiguous | 0.4491 | ambiguous | 1.155 | Stabilizing | 0.813 | D | 0.429 | neutral | None | None | None | None | N |
H/G | 0.6978 | likely_pathogenic | 0.7133 | pathogenic | 0.222 | Stabilizing | 0.553 | D | 0.499 | neutral | None | None | None | None | N |
H/I | 0.6844 | likely_pathogenic | 0.6879 | pathogenic | 1.132 | Stabilizing | 0.897 | D | 0.608 | neutral | None | None | None | None | N |
H/K | 0.6894 | likely_pathogenic | 0.7273 | pathogenic | 0.402 | Stabilizing | 0.712 | D | 0.467 | neutral | None | None | None | None | N |
H/L | 0.2157 | likely_benign | 0.2248 | benign | 1.132 | Stabilizing | 0.483 | N | 0.525 | neutral | N | 0.502178411 | None | None | N |
H/M | 0.6851 | likely_pathogenic | 0.6706 | pathogenic | 0.751 | Stabilizing | 0.995 | D | 0.594 | neutral | None | None | None | None | N |
H/N | 0.1893 | likely_benign | 0.1903 | benign | 0.264 | Stabilizing | 0.791 | D | 0.493 | neutral | N | 0.455080684 | None | None | N |
H/P | 0.2146 | likely_benign | 0.2285 | benign | 0.939 | Stabilizing | 0.93 | D | 0.64 | neutral | N | 0.466930877 | None | None | N |
H/Q | 0.5117 | ambiguous | 0.5546 | ambiguous | 0.361 | Stabilizing | 0.93 | D | 0.418 | neutral | N | 0.489827976 | None | None | N |
H/R | 0.4634 | ambiguous | 0.5335 | ambiguous | -0.185 | Destabilizing | 0.93 | D | 0.36 | neutral | N | 0.513992915 | None | None | N |
H/S | 0.5213 | ambiguous | 0.5185 | ambiguous | 0.436 | Stabilizing | 0.553 | D | 0.411 | neutral | None | None | None | None | N |
H/T | 0.6792 | likely_pathogenic | 0.6867 | pathogenic | 0.556 | Stabilizing | 0.712 | D | 0.499 | neutral | None | None | None | None | N |
H/V | 0.6145 | likely_pathogenic | 0.6287 | pathogenic | 0.939 | Stabilizing | 0.553 | D | 0.535 | neutral | None | None | None | None | N |
H/W | 0.5181 | ambiguous | 0.5051 | ambiguous | 1.095 | Stabilizing | 0.985 | D | 0.619 | neutral | None | None | None | None | N |
H/Y | 0.1321 | likely_benign | 0.1367 | benign | 1.342 | Stabilizing | 0.006 | N | 0.252 | neutral | N | 0.463796168 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.