Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20271 | 61036;61037;61038 | chr2:178590914;178590913;178590912 | chr2:179455641;179455640;179455639 |
N2AB | 18630 | 56113;56114;56115 | chr2:178590914;178590913;178590912 | chr2:179455641;179455640;179455639 |
N2A | 17703 | 53332;53333;53334 | chr2:178590914;178590913;178590912 | chr2:179455641;179455640;179455639 |
N2B | 11206 | 33841;33842;33843 | chr2:178590914;178590913;178590912 | chr2:179455641;179455640;179455639 |
Novex-1 | 11331 | 34216;34217;34218 | chr2:178590914;178590913;178590912 | chr2:179455641;179455640;179455639 |
Novex-2 | 11398 | 34417;34418;34419 | chr2:178590914;178590913;178590912 | chr2:179455641;179455640;179455639 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs367633145 | 0.495 | 0.993 | N | 0.821 | 0.334 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | rs367633145 | 0.495 | 0.993 | N | 0.821 | 0.334 | None | gnomAD-4.0.0 | 3.84882E-06 | None | None | None | None | I | None | 3.3857E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84738E-05 |
P/T | rs886055256 | None | 0.953 | N | 0.608 | 0.335 | 0.339074221408 | gnomAD-4.0.0 | 1.59373E-06 | None | None | None | None | I | None | 5.66572E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0901 | likely_benign | 0.0842 | benign | -0.318 | Destabilizing | 0.214 | N | 0.344 | neutral | N | 0.499311464 | None | None | I |
P/C | 0.3985 | ambiguous | 0.4156 | ambiguous | -0.554 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
P/D | 0.6848 | likely_pathogenic | 0.7141 | pathogenic | 0.009 | Stabilizing | 0.995 | D | 0.585 | neutral | None | None | None | None | I |
P/E | 0.3136 | likely_benign | 0.3389 | benign | -0.119 | Destabilizing | 0.995 | D | 0.561 | neutral | None | None | None | None | I |
P/F | 0.5091 | ambiguous | 0.5504 | ambiguous | -0.721 | Destabilizing | 0.995 | D | 0.821 | deleterious | None | None | None | None | I |
P/G | 0.5267 | ambiguous | 0.5309 | ambiguous | -0.405 | Destabilizing | 0.931 | D | 0.545 | neutral | None | None | None | None | I |
P/H | 0.258 | likely_benign | 0.3036 | benign | -0.064 | Destabilizing | 0.999 | D | 0.784 | deleterious | N | 0.488241591 | None | None | I |
P/I | 0.1412 | likely_benign | 0.1586 | benign | -0.25 | Destabilizing | 0.979 | D | 0.613 | neutral | None | None | None | None | I |
P/K | 0.2911 | likely_benign | 0.3376 | benign | -0.083 | Destabilizing | 0.99 | D | 0.549 | neutral | None | None | None | None | I |
P/L | 0.1014 | likely_benign | 0.1124 | benign | -0.25 | Destabilizing | 0.91 | D | 0.623 | neutral | N | 0.491694845 | None | None | I |
P/M | 0.2571 | likely_benign | 0.2698 | benign | -0.211 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | I |
P/N | 0.4821 | ambiguous | 0.5185 | ambiguous | 0.126 | Stabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | I |
P/Q | 0.1764 | likely_benign | 0.2054 | benign | -0.137 | Destabilizing | 0.998 | D | 0.544 | neutral | None | None | None | None | I |
P/R | 0.2048 | likely_benign | 0.2477 | benign | 0.362 | Stabilizing | 0.993 | D | 0.821 | deleterious | N | 0.499852969 | None | None | I |
P/S | 0.1618 | likely_benign | 0.1682 | benign | -0.243 | Destabilizing | 0.91 | D | 0.618 | neutral | N | 0.472984492 | None | None | I |
P/T | 0.1036 | likely_benign | 0.1092 | benign | -0.272 | Destabilizing | 0.953 | D | 0.608 | neutral | N | 0.486720654 | None | None | I |
P/V | 0.1038 | likely_benign | 0.1128 | benign | -0.24 | Destabilizing | 0.455 | N | 0.373 | neutral | None | None | None | None | I |
P/W | 0.761 | likely_pathogenic | 0.8056 | pathogenic | -0.776 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
P/Y | 0.5094 | ambiguous | 0.5476 | ambiguous | -0.439 | Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.