Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20284 | 61075;61076;61077 | chr2:178590875;178590874;178590873 | chr2:179455602;179455601;179455600 |
N2AB | 18643 | 56152;56153;56154 | chr2:178590875;178590874;178590873 | chr2:179455602;179455601;179455600 |
N2A | 17716 | 53371;53372;53373 | chr2:178590875;178590874;178590873 | chr2:179455602;179455601;179455600 |
N2B | 11219 | 33880;33881;33882 | chr2:178590875;178590874;178590873 | chr2:179455602;179455601;179455600 |
Novex-1 | 11344 | 34255;34256;34257 | chr2:178590875;178590874;178590873 | chr2:179455602;179455601;179455600 |
Novex-2 | 11411 | 34456;34457;34458 | chr2:178590875;178590874;178590873 | chr2:179455602;179455601;179455600 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.046 | N | 0.111 | 0.165 | 0.193865811164 | gnomAD-4.0.0 | 1.44039E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44375E-05 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1504 | likely_benign | 0.1992 | benign | -0.668 | Destabilizing | 0.046 | N | 0.111 | neutral | N | 0.478249001 | None | None | N |
T/C | 0.564 | likely_pathogenic | 0.6084 | pathogenic | -0.429 | Destabilizing | 0.999 | D | 0.412 | neutral | None | None | None | None | N |
T/D | 0.6596 | likely_pathogenic | 0.7367 | pathogenic | -0.564 | Destabilizing | 0.919 | D | 0.373 | neutral | None | None | None | None | N |
T/E | 0.6619 | likely_pathogenic | 0.7539 | pathogenic | -0.597 | Destabilizing | 0.919 | D | 0.361 | neutral | None | None | None | None | N |
T/F | 0.5794 | likely_pathogenic | 0.6506 | pathogenic | -0.86 | Destabilizing | 0.996 | D | 0.488 | neutral | None | None | None | None | N |
T/G | 0.3068 | likely_benign | 0.3641 | ambiguous | -0.889 | Destabilizing | 0.702 | D | 0.406 | neutral | None | None | None | None | N |
T/H | 0.5148 | ambiguous | 0.5831 | pathogenic | -1.237 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
T/I | 0.6272 | likely_pathogenic | 0.7317 | pathogenic | -0.18 | Destabilizing | 0.984 | D | 0.351 | neutral | N | 0.505191573 | None | None | N |
T/K | 0.4932 | ambiguous | 0.621 | pathogenic | -0.796 | Destabilizing | 0.919 | D | 0.37 | neutral | None | None | None | None | N |
T/L | 0.2292 | likely_benign | 0.297 | benign | -0.18 | Destabilizing | 0.919 | D | 0.362 | neutral | None | None | None | None | N |
T/M | 0.1596 | likely_benign | 0.2037 | benign | 0.209 | Stabilizing | 0.999 | D | 0.409 | neutral | None | None | None | None | N |
T/N | 0.2322 | likely_benign | 0.2824 | benign | -0.684 | Destabilizing | 0.896 | D | 0.381 | neutral | N | 0.505880438 | None | None | N |
T/P | 0.7745 | likely_pathogenic | 0.8285 | pathogenic | -0.312 | Destabilizing | 0.984 | D | 0.348 | neutral | N | 0.505191573 | None | None | N |
T/Q | 0.4455 | ambiguous | 0.5396 | ambiguous | -0.948 | Destabilizing | 0.988 | D | 0.382 | neutral | None | None | None | None | N |
T/R | 0.4099 | ambiguous | 0.532 | ambiguous | -0.46 | Destabilizing | 0.976 | D | 0.352 | neutral | None | None | None | None | N |
T/S | 0.1304 | likely_benign | 0.1492 | benign | -0.875 | Destabilizing | 0.046 | N | 0.097 | neutral | N | 0.436327139 | None | None | N |
T/V | 0.4158 | ambiguous | 0.5089 | ambiguous | -0.312 | Destabilizing | 0.919 | D | 0.37 | neutral | None | None | None | None | N |
T/W | 0.8505 | likely_pathogenic | 0.878 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.566 | neutral | None | None | None | None | N |
T/Y | 0.6349 | likely_pathogenic | 0.6967 | pathogenic | -0.571 | Destabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.