Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20285 | 61078;61079;61080 | chr2:178590872;178590871;178590870 | chr2:179455599;179455598;179455597 |
N2AB | 18644 | 56155;56156;56157 | chr2:178590872;178590871;178590870 | chr2:179455599;179455598;179455597 |
N2A | 17717 | 53374;53375;53376 | chr2:178590872;178590871;178590870 | chr2:179455599;179455598;179455597 |
N2B | 11220 | 33883;33884;33885 | chr2:178590872;178590871;178590870 | chr2:179455599;179455598;179455597 |
Novex-1 | 11345 | 34258;34259;34260 | chr2:178590872;178590871;178590870 | chr2:179455599;179455598;179455597 |
Novex-2 | 11412 | 34459;34460;34461 | chr2:178590872;178590871;178590870 | chr2:179455599;179455598;179455597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1362658901 | None | 0.999 | N | 0.584 | 0.431 | 0.289847578895 | gnomAD-4.0.0 | 2.05795E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70578E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2409 | likely_benign | 0.2905 | benign | -0.313 | Destabilizing | 0.999 | D | 0.625 | neutral | N | 0.440866167 | None | None | N |
E/C | 0.9288 | likely_pathogenic | 0.9465 | pathogenic | 0.161 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.2606 | likely_benign | 0.3176 | benign | -0.683 | Destabilizing | 0.999 | D | 0.445 | neutral | N | 0.454392825 | None | None | N |
E/F | 0.9568 | likely_pathogenic | 0.9687 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/G | 0.2688 | likely_benign | 0.3277 | benign | -0.537 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.465340537 | None | None | N |
E/H | 0.7936 | likely_pathogenic | 0.8328 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/I | 0.7601 | likely_pathogenic | 0.8036 | pathogenic | 0.243 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/K | 0.3782 | ambiguous | 0.4177 | ambiguous | 0.13 | Stabilizing | 0.999 | D | 0.584 | neutral | N | 0.399424976 | None | None | N |
E/L | 0.8054 | likely_pathogenic | 0.8448 | pathogenic | 0.243 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/M | 0.794 | likely_pathogenic | 0.8297 | pathogenic | 0.59 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/N | 0.5685 | likely_pathogenic | 0.6425 | pathogenic | -0.012 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/P | 0.6934 | likely_pathogenic | 0.7387 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
E/Q | 0.2836 | likely_benign | 0.3125 | benign | -0.008 | Destabilizing | 1.0 | D | 0.666 | neutral | N | 0.504725645 | None | None | N |
E/R | 0.5714 | likely_pathogenic | 0.6207 | pathogenic | 0.115 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/S | 0.3483 | ambiguous | 0.4162 | ambiguous | -0.204 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/T | 0.5585 | ambiguous | 0.6218 | pathogenic | -0.037 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
E/V | 0.5382 | ambiguous | 0.5989 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.480246782 | None | None | N |
E/W | 0.9748 | likely_pathogenic | 0.9825 | pathogenic | -0.569 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/Y | 0.8856 | likely_pathogenic | 0.9196 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.