Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20287 | 61084;61085;61086 | chr2:178590866;178590865;178590864 | chr2:179455593;179455592;179455591 |
N2AB | 18646 | 56161;56162;56163 | chr2:178590866;178590865;178590864 | chr2:179455593;179455592;179455591 |
N2A | 17719 | 53380;53381;53382 | chr2:178590866;178590865;178590864 | chr2:179455593;179455592;179455591 |
N2B | 11222 | 33889;33890;33891 | chr2:178590866;178590865;178590864 | chr2:179455593;179455592;179455591 |
Novex-1 | 11347 | 34264;34265;34266 | chr2:178590866;178590865;178590864 | chr2:179455593;179455592;179455591 |
Novex-2 | 11414 | 34465;34466;34467 | chr2:178590866;178590865;178590864 | chr2:179455593;179455592;179455591 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.885 | N | 0.537 | 0.236 | 0.353974658523 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3959 | ambiguous | 0.4588 | ambiguous | -1.334 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
A/D | 0.6821 | likely_pathogenic | 0.7913 | pathogenic | -2.09 | Highly Destabilizing | 0.986 | D | 0.711 | prob.delet. | None | None | None | None | N |
A/E | 0.5661 | likely_pathogenic | 0.6733 | pathogenic | -2.129 | Highly Destabilizing | 0.982 | D | 0.713 | prob.delet. | N | 0.484078227 | None | None | N |
A/F | 0.4719 | ambiguous | 0.5629 | ambiguous | -1.254 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/G | 0.132 | likely_benign | 0.1821 | benign | -1.174 | Destabilizing | 0.02 | N | 0.283 | neutral | N | 0.459798645 | None | None | N |
A/H | 0.6183 | likely_pathogenic | 0.6986 | pathogenic | -1.15 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/I | 0.5033 | ambiguous | 0.6468 | pathogenic | -0.565 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/K | 0.8035 | likely_pathogenic | 0.8934 | pathogenic | -1.148 | Destabilizing | 0.986 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/L | 0.3932 | ambiguous | 0.5223 | ambiguous | -0.565 | Destabilizing | 0.993 | D | 0.689 | prob.neutral | None | None | None | None | N |
A/M | 0.3321 | likely_benign | 0.4359 | ambiguous | -0.582 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
A/N | 0.4994 | ambiguous | 0.6205 | pathogenic | -1.089 | Destabilizing | 0.986 | D | 0.718 | prob.delet. | None | None | None | None | N |
A/P | 0.9788 | likely_pathogenic | 0.9871 | pathogenic | -0.665 | Destabilizing | 0.991 | D | 0.745 | deleterious | N | 0.492373102 | None | None | N |
A/Q | 0.5459 | ambiguous | 0.6464 | pathogenic | -1.363 | Destabilizing | 0.993 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/R | 0.7113 | likely_pathogenic | 0.8109 | pathogenic | -0.745 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
A/S | 0.0933 | likely_benign | 0.1054 | benign | -1.333 | Destabilizing | 0.58 | D | 0.348 | neutral | N | 0.35789528 | None | None | N |
A/T | 0.1274 | likely_benign | 0.1731 | benign | -1.299 | Destabilizing | 0.885 | D | 0.537 | neutral | N | 0.412562058 | None | None | N |
A/V | 0.272 | likely_benign | 0.3821 | ambiguous | -0.665 | Destabilizing | 0.969 | D | 0.559 | neutral | N | 0.490948271 | None | None | N |
A/W | 0.856 | likely_pathogenic | 0.905 | pathogenic | -1.522 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/Y | 0.6046 | likely_pathogenic | 0.6885 | pathogenic | -1.12 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.