Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20291 | 61096;61097;61098 | chr2:178590854;178590853;178590852 | chr2:179455581;179455580;179455579 |
N2AB | 18650 | 56173;56174;56175 | chr2:178590854;178590853;178590852 | chr2:179455581;179455580;179455579 |
N2A | 17723 | 53392;53393;53394 | chr2:178590854;178590853;178590852 | chr2:179455581;179455580;179455579 |
N2B | 11226 | 33901;33902;33903 | chr2:178590854;178590853;178590852 | chr2:179455581;179455580;179455579 |
Novex-1 | 11351 | 34276;34277;34278 | chr2:178590854;178590853;178590852 | chr2:179455581;179455580;179455579 |
Novex-2 | 11418 | 34477;34478;34479 | chr2:178590854;178590853;178590852 | chr2:179455581;179455580;179455579 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.484 | N | 0.607 | 0.434 | 0.63162399683 | gnomAD-4.0.0 | 1.60051E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78956E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.081 | likely_benign | 0.0755 | benign | -0.412 | Destabilizing | None | N | 0.183 | neutral | N | 0.501208124 | None | None | N |
S/C | 0.0864 | likely_benign | 0.0804 | benign | -0.247 | Destabilizing | 0.78 | D | 0.509 | neutral | N | 0.477100593 | None | None | N |
S/D | 0.5211 | ambiguous | 0.4904 | ambiguous | -0.382 | Destabilizing | 0.149 | N | 0.361 | neutral | None | None | None | None | N |
S/E | 0.4671 | ambiguous | 0.4347 | ambiguous | -0.288 | Destabilizing | 0.149 | N | 0.362 | neutral | None | None | None | None | N |
S/F | 0.1621 | likely_benign | 0.1581 | benign | -0.404 | Destabilizing | 0.484 | N | 0.607 | neutral | N | 0.500876387 | None | None | N |
S/G | 0.1068 | likely_benign | 0.101 | benign | -0.744 | Destabilizing | None | N | 0.152 | neutral | None | None | None | None | N |
S/H | 0.3054 | likely_benign | 0.2891 | benign | -1.26 | Destabilizing | 0.935 | D | 0.513 | neutral | None | None | None | None | N |
S/I | 0.1376 | likely_benign | 0.1395 | benign | 0.385 | Stabilizing | 0.38 | N | 0.571 | neutral | None | None | None | None | N |
S/K | 0.6154 | likely_pathogenic | 0.573 | pathogenic | -0.33 | Destabilizing | 0.149 | N | 0.36 | neutral | None | None | None | None | N |
S/L | 0.0886 | likely_benign | 0.0886 | benign | 0.385 | Stabilizing | 0.081 | N | 0.479 | neutral | None | None | None | None | N |
S/M | 0.1581 | likely_benign | 0.1508 | benign | 0.284 | Stabilizing | 0.824 | D | 0.513 | neutral | None | None | None | None | N |
S/N | 0.1526 | likely_benign | 0.1553 | benign | -0.61 | Destabilizing | 0.149 | N | 0.38 | neutral | None | None | None | None | N |
S/P | 0.9212 | likely_pathogenic | 0.9077 | pathogenic | 0.156 | Stabilizing | 0.317 | N | 0.484 | neutral | N | 0.518980642 | None | None | N |
S/Q | 0.4106 | ambiguous | 0.381 | ambiguous | -0.504 | Destabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | N |
S/R | 0.5098 | ambiguous | 0.4922 | ambiguous | -0.541 | Destabilizing | 0.38 | N | 0.499 | neutral | None | None | None | None | N |
S/T | 0.07 | likely_benign | 0.0691 | benign | -0.418 | Destabilizing | 0.002 | N | 0.2 | neutral | N | 0.442813181 | None | None | N |
S/V | 0.1555 | likely_benign | 0.1484 | benign | 0.156 | Stabilizing | 0.081 | N | 0.468 | neutral | None | None | None | None | N |
S/W | 0.3373 | likely_benign | 0.318 | benign | -0.6 | Destabilizing | 0.935 | D | 0.673 | neutral | None | None | None | None | N |
S/Y | 0.1689 | likely_benign | 0.1619 | benign | -0.189 | Destabilizing | 0.484 | N | 0.604 | neutral | N | 0.507624337 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.