Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20301 | 61126;61127;61128 | chr2:178590824;178590823;178590822 | chr2:179455551;179455550;179455549 |
N2AB | 18660 | 56203;56204;56205 | chr2:178590824;178590823;178590822 | chr2:179455551;179455550;179455549 |
N2A | 17733 | 53422;53423;53424 | chr2:178590824;178590823;178590822 | chr2:179455551;179455550;179455549 |
N2B | 11236 | 33931;33932;33933 | chr2:178590824;178590823;178590822 | chr2:179455551;179455550;179455549 |
Novex-1 | 11361 | 34306;34307;34308 | chr2:178590824;178590823;178590822 | chr2:179455551;179455550;179455549 |
Novex-2 | 11428 | 34507;34508;34509 | chr2:178590824;178590823;178590822 | chr2:179455551;179455550;179455549 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.939 | N | 0.603 | 0.28 | 0.225215365344 | gnomAD-4.0.0 | 1.60873E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.90458E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2438 | likely_benign | 0.2462 | benign | -0.485 | Destabilizing | 0.807 | D | 0.589 | neutral | None | None | None | None | I |
S/C | 0.1731 | likely_benign | 0.1856 | benign | -0.31 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.479121147 | None | None | I |
S/D | 0.8989 | likely_pathogenic | 0.9004 | pathogenic | -0.217 | Destabilizing | 0.953 | D | 0.7 | prob.neutral | None | None | None | None | I |
S/E | 0.9287 | likely_pathogenic | 0.939 | pathogenic | -0.287 | Destabilizing | 0.953 | D | 0.689 | prob.neutral | None | None | None | None | I |
S/F | 0.5229 | ambiguous | 0.6024 | pathogenic | -0.951 | Destabilizing | 0.993 | D | 0.72 | prob.delet. | None | None | None | None | I |
S/G | 0.4237 | ambiguous | 0.4331 | ambiguous | -0.646 | Destabilizing | 0.939 | D | 0.603 | neutral | N | 0.471476781 | None | None | I |
S/H | 0.6231 | likely_pathogenic | 0.6596 | pathogenic | -1.236 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
S/I | 0.6099 | likely_pathogenic | 0.6306 | pathogenic | -0.182 | Destabilizing | 0.982 | D | 0.73 | prob.delet. | N | 0.50336424 | None | None | I |
S/K | 0.9588 | likely_pathogenic | 0.9725 | pathogenic | -0.619 | Destabilizing | 0.953 | D | 0.698 | prob.neutral | None | None | None | None | I |
S/L | 0.2157 | likely_benign | 0.258 | benign | -0.182 | Destabilizing | 0.91 | D | 0.686 | prob.neutral | None | None | None | None | I |
S/M | 0.3888 | ambiguous | 0.4534 | ambiguous | 0.218 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
S/N | 0.4058 | ambiguous | 0.4002 | ambiguous | -0.405 | Destabilizing | 0.939 | D | 0.707 | prob.neutral | N | 0.50056631 | None | None | I |
S/P | 0.9891 | likely_pathogenic | 0.9892 | pathogenic | -0.252 | Destabilizing | 0.993 | D | 0.669 | neutral | None | None | None | None | I |
S/Q | 0.8394 | likely_pathogenic | 0.8653 | pathogenic | -0.69 | Destabilizing | 0.993 | D | 0.716 | prob.delet. | None | None | None | None | I |
S/R | 0.944 | likely_pathogenic | 0.9574 | pathogenic | -0.406 | Destabilizing | 0.991 | D | 0.668 | neutral | N | 0.491461276 | None | None | I |
S/T | 0.2521 | likely_benign | 0.2799 | benign | -0.465 | Destabilizing | 0.17 | N | 0.5 | neutral | N | 0.484512743 | None | None | I |
S/V | 0.5605 | ambiguous | 0.5754 | pathogenic | -0.252 | Destabilizing | 0.973 | D | 0.699 | prob.neutral | None | None | None | None | I |
S/W | 0.7207 | likely_pathogenic | 0.7791 | pathogenic | -0.926 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | I |
S/Y | 0.4475 | ambiguous | 0.5202 | ambiguous | -0.66 | Destabilizing | 0.998 | D | 0.72 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.