Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20302 | 61129;61130;61131 | chr2:178590821;178590820;178590819 | chr2:179455548;179455547;179455546 |
N2AB | 18661 | 56206;56207;56208 | chr2:178590821;178590820;178590819 | chr2:179455548;179455547;179455546 |
N2A | 17734 | 53425;53426;53427 | chr2:178590821;178590820;178590819 | chr2:179455548;179455547;179455546 |
N2B | 11237 | 33934;33935;33936 | chr2:178590821;178590820;178590819 | chr2:179455548;179455547;179455546 |
Novex-1 | 11362 | 34309;34310;34311 | chr2:178590821;178590820;178590819 | chr2:179455548;179455547;179455546 |
Novex-2 | 11429 | 34510;34511;34512 | chr2:178590821;178590820;178590819 | chr2:179455548;179455547;179455546 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.497 | N | 0.605 | 0.373 | 0.56369308836 | gnomAD-4.0.0 | 1.60886E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43658E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0816 | likely_benign | 0.0931 | benign | -0.48 | Destabilizing | 0.22 | N | 0.534 | neutral | N | 0.510902255 | None | None | I |
P/C | 0.4498 | ambiguous | 0.4997 | ambiguous | -0.61 | Destabilizing | 0.968 | D | 0.722 | prob.delet. | None | None | None | None | I |
P/D | 0.3914 | ambiguous | 0.4481 | ambiguous | -0.166 | Destabilizing | 0.567 | D | 0.518 | neutral | None | None | None | None | I |
P/E | 0.2278 | likely_benign | 0.2695 | benign | -0.279 | Destabilizing | 0.157 | N | 0.527 | neutral | None | None | None | None | I |
P/F | 0.4903 | ambiguous | 0.5662 | pathogenic | -0.714 | Destabilizing | 0.909 | D | 0.691 | prob.neutral | None | None | None | None | I |
P/G | 0.3718 | ambiguous | 0.4 | ambiguous | -0.619 | Destabilizing | 0.272 | N | 0.561 | neutral | None | None | None | None | I |
P/H | 0.1969 | likely_benign | 0.2258 | benign | -0.207 | Destabilizing | 0.909 | D | 0.67 | neutral | None | None | None | None | I |
P/I | 0.2609 | likely_benign | 0.306 | benign | -0.269 | Destabilizing | 0.726 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/K | 0.229 | likely_benign | 0.2561 | benign | -0.349 | Destabilizing | 0.157 | N | 0.527 | neutral | None | None | None | None | I |
P/L | 0.1155 | likely_benign | 0.1394 | benign | -0.269 | Destabilizing | 0.497 | N | 0.605 | neutral | N | 0.516179031 | None | None | I |
P/M | 0.263 | likely_benign | 0.2976 | benign | -0.264 | Destabilizing | 0.968 | D | 0.669 | neutral | None | None | None | None | I |
P/N | 0.3178 | likely_benign | 0.3602 | ambiguous | -0.086 | Destabilizing | 0.567 | D | 0.673 | neutral | None | None | None | None | I |
P/Q | 0.1406 | likely_benign | 0.1585 | benign | -0.337 | Destabilizing | 0.011 | N | 0.323 | neutral | N | 0.481412098 | None | None | I |
P/R | 0.1627 | likely_benign | 0.1896 | benign | 0.153 | Stabilizing | 0.002 | N | 0.405 | neutral | N | 0.483324655 | None | None | I |
P/S | 0.1411 | likely_benign | 0.1583 | benign | -0.485 | Destabilizing | 0.22 | N | 0.535 | neutral | N | 0.484690554 | None | None | I |
P/T | 0.109 | likely_benign | 0.1251 | benign | -0.494 | Destabilizing | 0.497 | N | 0.521 | neutral | N | 0.490539904 | None | None | I |
P/V | 0.166 | likely_benign | 0.1942 | benign | -0.304 | Destabilizing | 0.567 | D | 0.598 | neutral | None | None | None | None | I |
P/W | 0.6422 | likely_pathogenic | 0.7082 | pathogenic | -0.783 | Destabilizing | 0.968 | D | 0.72 | prob.delet. | None | None | None | None | I |
P/Y | 0.4363 | ambiguous | 0.5056 | ambiguous | -0.471 | Destabilizing | 0.726 | D | 0.712 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.