Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20307 | 61144;61145;61146 | chr2:178590806;178590805;178590804 | chr2:179455533;179455532;179455531 |
N2AB | 18666 | 56221;56222;56223 | chr2:178590806;178590805;178590804 | chr2:179455533;179455532;179455531 |
N2A | 17739 | 53440;53441;53442 | chr2:178590806;178590805;178590804 | chr2:179455533;179455532;179455531 |
N2B | 11242 | 33949;33950;33951 | chr2:178590806;178590805;178590804 | chr2:179455533;179455532;179455531 |
Novex-1 | 11367 | 34324;34325;34326 | chr2:178590806;178590805;178590804 | chr2:179455533;179455532;179455531 |
Novex-2 | 11434 | 34525;34526;34527 | chr2:178590806;178590805;178590804 | chr2:179455533;179455532;179455531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.975 | N | 0.553 | 0.369 | 0.615085622779 | gnomAD-4.0.0 | 6.87165E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.03551E-07 | 0 | 0 |
Y/F | rs1553643111 | None | 0.425 | N | 0.445 | 0.171 | 0.351180957027 | gnomAD-4.0.0 | 1.37433E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.8071E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5489 | ambiguous | 0.5355 | ambiguous | -3.095 | Highly Destabilizing | 0.495 | N | 0.549 | neutral | None | None | None | None | N |
Y/C | 0.0932 | likely_benign | 0.0982 | benign | -1.523 | Destabilizing | 0.975 | D | 0.553 | neutral | N | 0.476768252 | None | None | N |
Y/D | 0.6296 | likely_pathogenic | 0.6695 | pathogenic | -2.834 | Highly Destabilizing | 0.975 | D | 0.599 | neutral | N | 0.456526266 | None | None | N |
Y/E | 0.7651 | likely_pathogenic | 0.7737 | pathogenic | -2.661 | Highly Destabilizing | 0.936 | D | 0.551 | neutral | None | None | None | None | N |
Y/F | 0.0698 | likely_benign | 0.0635 | benign | -1.154 | Destabilizing | 0.425 | N | 0.445 | neutral | N | 0.437287144 | None | None | N |
Y/G | 0.6785 | likely_pathogenic | 0.6826 | pathogenic | -3.471 | Highly Destabilizing | 0.936 | D | 0.559 | neutral | None | None | None | None | N |
Y/H | 0.1093 | likely_benign | 0.114 | benign | -1.867 | Destabilizing | 0.975 | D | 0.558 | neutral | N | 0.41214077 | None | None | N |
Y/I | 0.1749 | likely_benign | 0.1548 | benign | -1.862 | Destabilizing | 0.001 | N | 0.35 | neutral | None | None | None | None | N |
Y/K | 0.692 | likely_pathogenic | 0.6733 | pathogenic | -1.97 | Destabilizing | 0.828 | D | 0.551 | neutral | None | None | None | None | N |
Y/L | 0.2802 | likely_benign | 0.2537 | benign | -1.862 | Destabilizing | 0.001 | N | 0.349 | neutral | None | None | None | None | N |
Y/M | 0.434 | ambiguous | 0.3758 | ambiguous | -1.498 | Destabilizing | 0.893 | D | 0.593 | neutral | None | None | None | None | N |
Y/N | 0.2586 | likely_benign | 0.2558 | benign | -2.559 | Highly Destabilizing | 0.975 | D | 0.585 | neutral | N | 0.446213272 | None | None | N |
Y/P | 0.9728 | likely_pathogenic | 0.9753 | pathogenic | -2.284 | Highly Destabilizing | 0.981 | D | 0.606 | neutral | None | None | None | None | N |
Y/Q | 0.487 | ambiguous | 0.4918 | ambiguous | -2.406 | Highly Destabilizing | 0.981 | D | 0.593 | neutral | None | None | None | None | N |
Y/R | 0.4816 | ambiguous | 0.4848 | ambiguous | -1.565 | Destabilizing | 0.944 | D | 0.583 | neutral | None | None | None | None | N |
Y/S | 0.2666 | likely_benign | 0.2625 | benign | -2.977 | Highly Destabilizing | 0.784 | D | 0.559 | neutral | N | 0.446423916 | None | None | N |
Y/T | 0.3863 | ambiguous | 0.3669 | ambiguous | -2.703 | Highly Destabilizing | 0.495 | N | 0.551 | neutral | None | None | None | None | N |
Y/V | 0.1754 | likely_benign | 0.1584 | benign | -2.284 | Highly Destabilizing | 0.085 | N | 0.463 | neutral | None | None | None | None | N |
Y/W | 0.269 | likely_benign | 0.2732 | benign | -0.457 | Destabilizing | 0.981 | D | 0.58 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.