Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20312 | 61159;61160;61161 | chr2:178590791;178590790;178590789 | chr2:179455518;179455517;179455516 |
N2AB | 18671 | 56236;56237;56238 | chr2:178590791;178590790;178590789 | chr2:179455518;179455517;179455516 |
N2A | 17744 | 53455;53456;53457 | chr2:178590791;178590790;178590789 | chr2:179455518;179455517;179455516 |
N2B | 11247 | 33964;33965;33966 | chr2:178590791;178590790;178590789 | chr2:179455518;179455517;179455516 |
Novex-1 | 11372 | 34339;34340;34341 | chr2:178590791;178590790;178590789 | chr2:179455518;179455517;179455516 |
Novex-2 | 11439 | 34540;34541;34542 | chr2:178590791;178590790;178590789 | chr2:179455518;179455517;179455516 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1337998707 | -0.76 | 0.954 | N | 0.492 | 0.194 | 0.240491677333 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14705E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1337998707 | -0.76 | 0.954 | N | 0.492 | 0.194 | 0.240491677333 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1337998707 | -0.76 | 0.954 | N | 0.492 | 0.194 | 0.240491677333 | gnomAD-4.0.0 | 6.57514E-06 | None | None | None | None | N | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs759127797 | -0.064 | 0.961 | N | 0.529 | 0.31 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs759127797 | -0.064 | 0.961 | N | 0.529 | 0.31 | None | gnomAD-4.0.0 | 4.35545E-06 | None | None | None | None | N | None | 2.67423E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.25599E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4616 | ambiguous | 0.4519 | ambiguous | -1.032 | Destabilizing | 0.98 | D | 0.547 | neutral | N | 0.511459616 | None | None | N |
E/C | 0.9562 | likely_pathogenic | 0.9564 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/D | 0.2887 | likely_benign | 0.2874 | benign | -1.218 | Destabilizing | 0.954 | D | 0.492 | neutral | N | 0.50131998 | None | None | N |
E/F | 0.9588 | likely_pathogenic | 0.9617 | pathogenic | -0.511 | Destabilizing | 0.996 | D | 0.684 | prob.neutral | None | None | None | None | N |
E/G | 0.5721 | likely_pathogenic | 0.5474 | ambiguous | -1.417 | Destabilizing | 0.98 | D | 0.545 | neutral | N | 0.518617662 | None | None | N |
E/H | 0.8361 | likely_pathogenic | 0.8332 | pathogenic | -0.852 | Destabilizing | 0.092 | N | 0.152 | neutral | None | None | None | None | N |
E/I | 0.8247 | likely_pathogenic | 0.8216 | pathogenic | 0.031 | Stabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/K | 0.6645 | likely_pathogenic | 0.6531 | pathogenic | -0.833 | Destabilizing | 0.961 | D | 0.529 | neutral | N | 0.434017553 | None | None | N |
E/L | 0.7924 | likely_pathogenic | 0.7967 | pathogenic | 0.031 | Stabilizing | 0.996 | D | 0.551 | neutral | None | None | None | None | N |
E/M | 0.809 | likely_pathogenic | 0.8125 | pathogenic | 0.558 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
E/N | 0.6659 | likely_pathogenic | 0.6549 | pathogenic | -1.235 | Destabilizing | 0.97 | D | 0.512 | neutral | None | None | None | None | N |
E/P | 0.8768 | likely_pathogenic | 0.8511 | pathogenic | -0.303 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
E/Q | 0.4419 | ambiguous | 0.4417 | ambiguous | -1.092 | Destabilizing | 0.98 | D | 0.486 | neutral | N | 0.476724382 | None | None | N |
E/R | 0.7701 | likely_pathogenic | 0.7596 | pathogenic | -0.595 | Destabilizing | 0.97 | D | 0.499 | neutral | None | None | None | None | N |
E/S | 0.6022 | likely_pathogenic | 0.595 | pathogenic | -1.633 | Destabilizing | 0.985 | D | 0.496 | neutral | None | None | None | None | N |
E/T | 0.7214 | likely_pathogenic | 0.7148 | pathogenic | -1.31 | Destabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | N |
E/V | 0.6457 | likely_pathogenic | 0.6364 | pathogenic | -0.303 | Destabilizing | 0.998 | D | 0.543 | neutral | N | 0.512153049 | None | None | N |
E/W | 0.9826 | likely_pathogenic | 0.984 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/Y | 0.9337 | likely_pathogenic | 0.9345 | pathogenic | -0.258 | Destabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.