Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20314 | 61165;61166;61167 | chr2:178590785;178590784;178590783 | chr2:179455512;179455511;179455510 |
N2AB | 18673 | 56242;56243;56244 | chr2:178590785;178590784;178590783 | chr2:179455512;179455511;179455510 |
N2A | 17746 | 53461;53462;53463 | chr2:178590785;178590784;178590783 | chr2:179455512;179455511;179455510 |
N2B | 11249 | 33970;33971;33972 | chr2:178590785;178590784;178590783 | chr2:179455512;179455511;179455510 |
Novex-1 | 11374 | 34345;34346;34347 | chr2:178590785;178590784;178590783 | chr2:179455512;179455511;179455510 |
Novex-2 | 11441 | 34546;34547;34548 | chr2:178590785;178590784;178590783 | chr2:179455512;179455511;179455510 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.891 | N | 0.327 | 0.208 | 0.270447802918 | gnomAD-4.0.0 | 1.37456E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80706E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0837 | likely_benign | 0.0852 | benign | -0.166 | Destabilizing | 0.267 | N | 0.184 | neutral | N | 0.468591486 | None | None | N |
T/C | 0.3252 | likely_benign | 0.3542 | ambiguous | -0.453 | Destabilizing | 0.998 | D | 0.279 | neutral | None | None | None | None | N |
T/D | 0.3232 | likely_benign | 0.3405 | ambiguous | -0.048 | Destabilizing | 0.842 | D | 0.329 | neutral | None | None | None | None | N |
T/E | 0.3157 | likely_benign | 0.3253 | benign | -0.14 | Destabilizing | 0.842 | D | 0.323 | neutral | None | None | None | None | N |
T/F | 0.2431 | likely_benign | 0.2744 | benign | -0.829 | Destabilizing | 0.991 | D | 0.319 | neutral | None | None | None | None | N |
T/G | 0.161 | likely_benign | 0.1644 | benign | -0.217 | Destabilizing | 0.002 | N | 0.205 | neutral | None | None | None | None | N |
T/H | 0.2126 | likely_benign | 0.2425 | benign | -0.343 | Destabilizing | 0.991 | D | 0.293 | neutral | None | None | None | None | N |
T/I | 0.2746 | likely_benign | 0.2806 | benign | -0.153 | Destabilizing | 0.966 | D | 0.316 | neutral | N | 0.479295276 | None | None | N |
T/K | 0.2204 | likely_benign | 0.2427 | benign | -0.336 | Destabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | N |
T/L | 0.1166 | likely_benign | 0.1303 | benign | -0.153 | Destabilizing | 0.842 | D | 0.322 | neutral | None | None | None | None | N |
T/M | 0.0926 | likely_benign | 0.1 | benign | -0.214 | Destabilizing | 0.991 | D | 0.277 | neutral | None | None | None | None | N |
T/N | 0.0986 | likely_benign | 0.105 | benign | -0.174 | Destabilizing | 0.801 | D | 0.313 | neutral | N | 0.449405506 | None | None | N |
T/P | 0.1761 | likely_benign | 0.1848 | benign | -0.134 | Destabilizing | 0.891 | D | 0.327 | neutral | N | 0.479077839 | None | None | N |
T/Q | 0.2263 | likely_benign | 0.2429 | benign | -0.375 | Destabilizing | 0.974 | D | 0.314 | neutral | None | None | None | None | N |
T/R | 0.1742 | likely_benign | 0.2092 | benign | -0.034 | Destabilizing | 0.842 | D | 0.343 | neutral | None | None | None | None | N |
T/S | 0.0823 | likely_benign | 0.0849 | benign | -0.329 | Destabilizing | 0.007 | N | 0.113 | neutral | N | 0.380375069 | None | None | N |
T/V | 0.2139 | likely_benign | 0.219 | benign | -0.134 | Destabilizing | 0.842 | D | 0.295 | neutral | None | None | None | None | N |
T/W | 0.4719 | ambiguous | 0.5353 | ambiguous | -0.921 | Destabilizing | 0.998 | D | 0.324 | neutral | None | None | None | None | N |
T/Y | 0.2692 | likely_benign | 0.2985 | benign | -0.6 | Destabilizing | 0.991 | D | 0.301 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.