Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20319 | 61180;61181;61182 | chr2:178590770;178590769;178590768 | chr2:179455497;179455496;179455495 |
N2AB | 18678 | 56257;56258;56259 | chr2:178590770;178590769;178590768 | chr2:179455497;179455496;179455495 |
N2A | 17751 | 53476;53477;53478 | chr2:178590770;178590769;178590768 | chr2:179455497;179455496;179455495 |
N2B | 11254 | 33985;33986;33987 | chr2:178590770;178590769;178590768 | chr2:179455497;179455496;179455495 |
Novex-1 | 11379 | 34360;34361;34362 | chr2:178590770;178590769;178590768 | chr2:179455497;179455496;179455495 |
Novex-2 | 11446 | 34561;34562;34563 | chr2:178590770;178590769;178590768 | chr2:179455497;179455496;179455495 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 1.0 | N | 0.775 | 0.32 | 0.265010934533 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7147 | likely_pathogenic | 0.7309 | pathogenic | -0.791 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
R/C | 0.2947 | likely_benign | 0.3171 | benign | -0.854 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
R/D | 0.9491 | likely_pathogenic | 0.9503 | pathogenic | 0.029 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
R/E | 0.7603 | likely_pathogenic | 0.7719 | pathogenic | 0.194 | Stabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
R/F | 0.8255 | likely_pathogenic | 0.8233 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
R/G | 0.7203 | likely_pathogenic | 0.7277 | pathogenic | -1.131 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.488992514 | None | None | N |
R/H | 0.22 | likely_benign | 0.2328 | benign | -1.288 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
R/I | 0.5353 | ambiguous | 0.5385 | ambiguous | 0.136 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
R/K | 0.1593 | likely_benign | 0.1598 | benign | -0.676 | Destabilizing | 0.997 | D | 0.512 | neutral | N | 0.424339277 | None | None | N |
R/L | 0.4108 | ambiguous | 0.4085 | ambiguous | 0.136 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/M | 0.4909 | ambiguous | 0.4938 | ambiguous | -0.423 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.471141748 | None | None | N |
R/N | 0.884 | likely_pathogenic | 0.8802 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
R/P | 0.611 | likely_pathogenic | 0.642 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
R/Q | 0.1838 | likely_benign | 0.1926 | benign | -0.421 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
R/S | 0.8524 | likely_pathogenic | 0.8647 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.499258323 | None | None | N |
R/T | 0.5592 | ambiguous | 0.5813 | pathogenic | -0.791 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.477805615 | None | None | N |
R/V | 0.6044 | likely_pathogenic | 0.6109 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
R/W | 0.3617 | ambiguous | 0.375 | ambiguous | -0.035 | Destabilizing | 1.0 | D | 0.764 | deleterious | N | 0.511616219 | None | None | N |
R/Y | 0.6954 | likely_pathogenic | 0.7021 | pathogenic | 0.22 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.