Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20324 | 61195;61196;61197 | chr2:178590755;178590754;178590753 | chr2:179455482;179455481;179455480 |
N2AB | 18683 | 56272;56273;56274 | chr2:178590755;178590754;178590753 | chr2:179455482;179455481;179455480 |
N2A | 17756 | 53491;53492;53493 | chr2:178590755;178590754;178590753 | chr2:179455482;179455481;179455480 |
N2B | 11259 | 34000;34001;34002 | chr2:178590755;178590754;178590753 | chr2:179455482;179455481;179455480 |
Novex-1 | 11384 | 34375;34376;34377 | chr2:178590755;178590754;178590753 | chr2:179455482;179455481;179455480 |
Novex-2 | 11451 | 34576;34577;34578 | chr2:178590755;178590754;178590753 | chr2:179455482;179455481;179455480 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.999 | N | 0.779 | 0.406 | 0.490213675041 | gnomAD-4.0.0 | 6.86621E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02537E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0878 | likely_benign | 0.091 | benign | -1.222 | Destabilizing | 0.767 | D | 0.355 | neutral | N | 0.514323776 | None | None | N |
P/C | 0.4909 | ambiguous | 0.5195 | ambiguous | -0.751 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/D | 0.8496 | likely_pathogenic | 0.8659 | pathogenic | -0.884 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/E | 0.5853 | likely_pathogenic | 0.5982 | pathogenic | -0.91 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/F | 0.6778 | likely_pathogenic | 0.7116 | pathogenic | -0.95 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/G | 0.4916 | ambiguous | 0.5118 | ambiguous | -1.501 | Destabilizing | 0.997 | D | 0.692 | prob.neutral | None | None | None | None | N |
P/H | 0.3941 | ambiguous | 0.4145 | ambiguous | -0.99 | Destabilizing | 1.0 | D | 0.788 | deleterious | N | 0.473383474 | None | None | N |
P/I | 0.3105 | likely_benign | 0.3257 | benign | -0.575 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
P/K | 0.4903 | ambiguous | 0.4739 | ambiguous | -1.021 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/L | 0.1378 | likely_benign | 0.1426 | benign | -0.575 | Destabilizing | 0.999 | D | 0.779 | deleterious | N | 0.496335448 | None | None | N |
P/M | 0.3537 | ambiguous | 0.3581 | ambiguous | -0.429 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
P/N | 0.6165 | likely_pathogenic | 0.635 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
P/Q | 0.2806 | likely_benign | 0.293 | benign | -0.965 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
P/R | 0.3258 | likely_benign | 0.3225 | benign | -0.478 | Destabilizing | 0.999 | D | 0.823 | deleterious | N | 0.463705328 | None | None | N |
P/S | 0.2301 | likely_benign | 0.2527 | benign | -1.273 | Destabilizing | 0.998 | D | 0.708 | prob.delet. | N | 0.503453421 | None | None | N |
P/T | 0.1688 | likely_benign | 0.1792 | benign | -1.194 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.502858775 | None | None | N |
P/V | 0.2009 | likely_benign | 0.2088 | benign | -0.755 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
P/W | 0.818 | likely_pathogenic | 0.851 | pathogenic | -1.108 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/Y | 0.6686 | likely_pathogenic | 0.7009 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.