Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20327 | 61204;61205;61206 | chr2:178590746;178590745;178590744 | chr2:179455473;179455472;179455471 |
N2AB | 18686 | 56281;56282;56283 | chr2:178590746;178590745;178590744 | chr2:179455473;179455472;179455471 |
N2A | 17759 | 53500;53501;53502 | chr2:178590746;178590745;178590744 | chr2:179455473;179455472;179455471 |
N2B | 11262 | 34009;34010;34011 | chr2:178590746;178590745;178590744 | chr2:179455473;179455472;179455471 |
Novex-1 | 11387 | 34384;34385;34386 | chr2:178590746;178590745;178590744 | chr2:179455473;179455472;179455471 |
Novex-2 | 11454 | 34585;34586;34587 | chr2:178590746;178590745;178590744 | chr2:179455473;179455472;179455471 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 0.619 | N | 0.277 | 0.057 | 0.212008924253 | gnomAD-4.0.0 | 6.85362E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00705E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2183 | likely_benign | 0.1799 | benign | 0.208 | Stabilizing | 0.998 | D | 0.685 | prob.neutral | N | 0.498951679 | None | None | N |
D/C | 0.6778 | likely_pathogenic | 0.6104 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
D/E | 0.1722 | likely_benign | 0.1431 | benign | -0.489 | Destabilizing | 0.619 | D | 0.277 | neutral | N | 0.463145594 | None | None | N |
D/F | 0.6863 | likely_pathogenic | 0.6501 | pathogenic | 0.721 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
D/G | 0.1858 | likely_benign | 0.1463 | benign | -0.087 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | N | 0.511688902 | None | None | N |
D/H | 0.3996 | ambiguous | 0.3401 | ambiguous | 1.035 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.477129229 | None | None | N |
D/I | 0.5793 | likely_pathogenic | 0.5034 | ambiguous | 0.966 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
D/K | 0.5551 | ambiguous | 0.4454 | ambiguous | 0.308 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/L | 0.5055 | ambiguous | 0.4248 | ambiguous | 0.966 | Stabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
D/M | 0.6757 | likely_pathogenic | 0.6163 | pathogenic | 0.751 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
D/N | 0.1285 | likely_benign | 0.1146 | benign | -0.394 | Destabilizing | 0.999 | D | 0.661 | neutral | N | 0.519094877 | None | None | N |
D/P | 0.846 | likely_pathogenic | 0.8005 | pathogenic | 0.738 | Stabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
D/Q | 0.4286 | ambiguous | 0.3506 | ambiguous | -0.238 | Destabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | N |
D/R | 0.5901 | likely_pathogenic | 0.5029 | ambiguous | 0.673 | Stabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
D/S | 0.1381 | likely_benign | 0.124 | benign | -0.52 | Destabilizing | 0.994 | D | 0.639 | neutral | None | None | None | None | N |
D/T | 0.3123 | likely_benign | 0.2572 | benign | -0.248 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
D/V | 0.3701 | ambiguous | 0.3033 | benign | 0.738 | Stabilizing | 0.999 | D | 0.783 | deleterious | N | 0.50970739 | None | None | N |
D/W | 0.9308 | likely_pathogenic | 0.9106 | pathogenic | 0.846 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
D/Y | 0.3538 | ambiguous | 0.3052 | benign | 0.996 | Stabilizing | 1.0 | D | 0.768 | deleterious | N | 0.479913933 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.