Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20332 | 61219;61220;61221 | chr2:178590731;178590730;178590729 | chr2:179455458;179455457;179455456 |
N2AB | 18691 | 56296;56297;56298 | chr2:178590731;178590730;178590729 | chr2:179455458;179455457;179455456 |
N2A | 17764 | 53515;53516;53517 | chr2:178590731;178590730;178590729 | chr2:179455458;179455457;179455456 |
N2B | 11267 | 34024;34025;34026 | chr2:178590731;178590730;178590729 | chr2:179455458;179455457;179455456 |
Novex-1 | 11392 | 34399;34400;34401 | chr2:178590731;178590730;178590729 | chr2:179455458;179455457;179455456 |
Novex-2 | 11459 | 34600;34601;34602 | chr2:178590731;178590730;178590729 | chr2:179455458;179455457;179455456 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs961573875 | -0.333 | 0.997 | N | 0.693 | 0.395 | 0.570128362464 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
V/M | rs961573875 | -0.333 | 0.997 | N | 0.693 | 0.395 | 0.570128362464 | gnomAD-4.0.0 | 5.58301E-06 | None | None | None | None | N | None | 1.33576E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78608E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3387 | likely_benign | 0.3281 | benign | -1.855 | Destabilizing | 0.02 | N | 0.307 | neutral | D | 0.527741364 | None | None | N |
V/C | 0.8327 | likely_pathogenic | 0.8207 | pathogenic | -1.424 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
V/D | 0.9728 | likely_pathogenic | 0.961 | pathogenic | -2.211 | Highly Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | N |
V/E | 0.9349 | likely_pathogenic | 0.9225 | pathogenic | -1.971 | Destabilizing | 0.982 | D | 0.831 | deleterious | D | 0.532414089 | None | None | N |
V/F | 0.6708 | likely_pathogenic | 0.677 | pathogenic | -1.104 | Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | N |
V/G | 0.6953 | likely_pathogenic | 0.6416 | pathogenic | -2.411 | Highly Destabilizing | 0.885 | D | 0.802 | deleterious | D | 0.543934979 | None | None | N |
V/H | 0.9792 | likely_pathogenic | 0.9775 | pathogenic | -2.124 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
V/I | 0.1145 | likely_benign | 0.1328 | benign | -0.304 | Destabilizing | 0.893 | D | 0.547 | neutral | None | None | None | None | N |
V/K | 0.975 | likely_pathogenic | 0.9698 | pathogenic | -1.504 | Destabilizing | 0.986 | D | 0.843 | deleterious | None | None | None | None | N |
V/L | 0.5407 | ambiguous | 0.5792 | pathogenic | -0.304 | Destabilizing | 0.863 | D | 0.66 | neutral | N | 0.51622793 | None | None | N |
V/M | 0.4345 | ambiguous | 0.4943 | ambiguous | -0.385 | Destabilizing | 0.997 | D | 0.693 | prob.neutral | N | 0.513802855 | None | None | N |
V/N | 0.9103 | likely_pathogenic | 0.8961 | pathogenic | -1.858 | Destabilizing | 0.993 | D | 0.859 | deleterious | None | None | None | None | N |
V/P | 0.9735 | likely_pathogenic | 0.9608 | pathogenic | -0.793 | Destabilizing | 0.993 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.9344 | likely_pathogenic | 0.9286 | pathogenic | -1.648 | Destabilizing | 0.993 | D | 0.841 | deleterious | None | None | None | None | N |
V/R | 0.9684 | likely_pathogenic | 0.9583 | pathogenic | -1.472 | Destabilizing | 0.993 | D | 0.857 | deleterious | None | None | None | None | N |
V/S | 0.6373 | likely_pathogenic | 0.5922 | pathogenic | -2.515 | Highly Destabilizing | 0.91 | D | 0.783 | deleterious | None | None | None | None | N |
V/T | 0.5227 | ambiguous | 0.5097 | ambiguous | -2.108 | Highly Destabilizing | 0.953 | D | 0.665 | neutral | None | None | None | None | N |
V/W | 0.9925 | likely_pathogenic | 0.9923 | pathogenic | -1.561 | Destabilizing | 0.999 | D | 0.822 | deleterious | None | None | None | None | N |
V/Y | 0.9559 | likely_pathogenic | 0.9519 | pathogenic | -1.142 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.