Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20339 | 61240;61241;61242 | chr2:178590710;178590709;178590708 | chr2:179455437;179455436;179455435 |
N2AB | 18698 | 56317;56318;56319 | chr2:178590710;178590709;178590708 | chr2:179455437;179455436;179455435 |
N2A | 17771 | 53536;53537;53538 | chr2:178590710;178590709;178590708 | chr2:179455437;179455436;179455435 |
N2B | 11274 | 34045;34046;34047 | chr2:178590710;178590709;178590708 | chr2:179455437;179455436;179455435 |
Novex-1 | 11399 | 34420;34421;34422 | chr2:178590710;178590709;178590708 | chr2:179455437;179455436;179455435 |
Novex-2 | 11466 | 34621;34622;34623 | chr2:178590710;178590709;178590708 | chr2:179455437;179455436;179455435 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.997 | N | 0.673 | 0.251 | 0.107399877778 | gnomAD-4.0.0 | 1.59306E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86136E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.359 | ambiguous | 0.3356 | benign | -0.781 | Destabilizing | 0.91 | D | 0.585 | neutral | None | None | None | None | N |
N/C | 0.259 | likely_benign | 0.2472 | benign | 0.103 | Stabilizing | 0.128 | N | 0.431 | neutral | None | None | None | None | N |
N/D | 0.4187 | ambiguous | 0.3835 | ambiguous | -0.036 | Destabilizing | 0.99 | D | 0.561 | neutral | N | 0.482711863 | None | None | N |
N/E | 0.7052 | likely_pathogenic | 0.6475 | pathogenic | 0.028 | Stabilizing | 0.998 | D | 0.67 | neutral | None | None | None | None | N |
N/F | 0.6487 | likely_pathogenic | 0.639 | pathogenic | -0.643 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
N/G | 0.4517 | ambiguous | 0.4208 | ambiguous | -1.082 | Destabilizing | 0.976 | D | 0.471 | neutral | None | None | None | None | N |
N/H | 0.1545 | likely_benign | 0.1458 | benign | -0.819 | Destabilizing | 0.997 | D | 0.675 | prob.neutral | N | 0.473093229 | None | None | N |
N/I | 0.2882 | likely_benign | 0.276 | benign | -0.03 | Destabilizing | 0.982 | D | 0.732 | prob.delet. | N | 0.445618626 | None | None | N |
N/K | 0.5441 | ambiguous | 0.4888 | ambiguous | -0.211 | Destabilizing | 0.997 | D | 0.673 | neutral | N | 0.465684467 | None | None | N |
N/L | 0.3205 | likely_benign | 0.3217 | benign | -0.03 | Destabilizing | 0.973 | D | 0.719 | prob.delet. | None | None | None | None | N |
N/M | 0.3994 | ambiguous | 0.4047 | ambiguous | 0.268 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
N/P | 0.9488 | likely_pathogenic | 0.9458 | pathogenic | -0.251 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
N/Q | 0.4903 | ambiguous | 0.4532 | ambiguous | -0.632 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
N/R | 0.5489 | ambiguous | 0.5009 | ambiguous | -0.222 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
N/S | 0.1206 | likely_benign | 0.1105 | benign | -0.686 | Destabilizing | 0.939 | D | 0.473 | neutral | N | 0.456640909 | None | None | N |
N/T | 0.2294 | likely_benign | 0.2115 | benign | -0.438 | Destabilizing | 0.939 | D | 0.595 | neutral | N | 0.411324333 | None | None | N |
N/V | 0.2883 | likely_benign | 0.2766 | benign | -0.251 | Destabilizing | 0.986 | D | 0.748 | deleterious | None | None | None | None | N |
N/W | 0.8725 | likely_pathogenic | 0.867 | pathogenic | -0.457 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/Y | 0.2539 | likely_benign | 0.2349 | benign | -0.264 | Destabilizing | 0.997 | D | 0.725 | prob.delet. | N | 0.471697953 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.