Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20345 | 61258;61259;61260 | chr2:178590692;178590691;178590690 | chr2:179455419;179455418;179455417 |
N2AB | 18704 | 56335;56336;56337 | chr2:178590692;178590691;178590690 | chr2:179455419;179455418;179455417 |
N2A | 17777 | 53554;53555;53556 | chr2:178590692;178590691;178590690 | chr2:179455419;179455418;179455417 |
N2B | 11280 | 34063;34064;34065 | chr2:178590692;178590691;178590690 | chr2:179455419;179455418;179455417 |
Novex-1 | 11405 | 34438;34439;34440 | chr2:178590692;178590691;178590690 | chr2:179455419;179455418;179455417 |
Novex-2 | 11472 | 34639;34640;34641 | chr2:178590692;178590691;178590690 | chr2:179455419;179455418;179455417 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.991 | D | 0.889 | 0.724 | 0.790947836327 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5231 | ambiguous | 0.5616 | ambiguous | -2.695 | Highly Destabilizing | 0.046 | N | 0.306 | neutral | D | 0.541452304 | None | None | N |
V/C | 0.8749 | likely_pathogenic | 0.8835 | pathogenic | -2.174 | Highly Destabilizing | 0.998 | D | 0.78 | deleterious | None | None | None | None | N |
V/D | 0.994 | likely_pathogenic | 0.9923 | pathogenic | -3.395 | Highly Destabilizing | 0.991 | D | 0.889 | deleterious | D | 0.645967356 | None | None | N |
V/E | 0.9894 | likely_pathogenic | 0.9863 | pathogenic | -3.103 | Highly Destabilizing | 0.986 | D | 0.849 | deleterious | None | None | None | None | N |
V/F | 0.8295 | likely_pathogenic | 0.8291 | pathogenic | -1.343 | Destabilizing | 0.991 | D | 0.781 | deleterious | D | 0.579306655 | None | None | N |
V/G | 0.7872 | likely_pathogenic | 0.7703 | pathogenic | -3.233 | Highly Destabilizing | 0.964 | D | 0.832 | deleterious | D | 0.645967356 | None | None | N |
V/H | 0.9963 | likely_pathogenic | 0.9956 | pathogenic | -2.898 | Highly Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
V/I | 0.1037 | likely_benign | 0.1124 | benign | -1.105 | Destabilizing | 0.863 | D | 0.547 | neutral | D | 0.536622711 | None | None | N |
V/K | 0.995 | likely_pathogenic | 0.9928 | pathogenic | -2.128 | Highly Destabilizing | 0.986 | D | 0.849 | deleterious | None | None | None | None | N |
V/L | 0.5664 | likely_pathogenic | 0.5853 | pathogenic | -1.105 | Destabilizing | 0.863 | D | 0.612 | neutral | D | 0.522913068 | None | None | N |
V/M | 0.6099 | likely_pathogenic | 0.6497 | pathogenic | -1.479 | Destabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/N | 0.9698 | likely_pathogenic | 0.9661 | pathogenic | -2.73 | Highly Destabilizing | 0.993 | D | 0.905 | deleterious | None | None | None | None | N |
V/P | 0.9907 | likely_pathogenic | 0.9863 | pathogenic | -1.622 | Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | N |
V/Q | 0.9873 | likely_pathogenic | 0.9844 | pathogenic | -2.398 | Highly Destabilizing | 0.993 | D | 0.885 | deleterious | None | None | None | None | N |
V/R | 0.9889 | likely_pathogenic | 0.9836 | pathogenic | -2.113 | Highly Destabilizing | 0.993 | D | 0.903 | deleterious | None | None | None | None | N |
V/S | 0.8271 | likely_pathogenic | 0.8343 | pathogenic | -3.217 | Highly Destabilizing | 0.973 | D | 0.817 | deleterious | None | None | None | None | N |
V/T | 0.6582 | likely_pathogenic | 0.7296 | pathogenic | -2.793 | Highly Destabilizing | 0.953 | D | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9978 | likely_pathogenic | 0.9975 | pathogenic | -1.836 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/Y | 0.9842 | likely_pathogenic | 0.9816 | pathogenic | -1.692 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.