Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20348 | 61267;61268;61269 | chr2:178590683;178590682;178590681 | chr2:179455410;179455409;179455408 |
N2AB | 18707 | 56344;56345;56346 | chr2:178590683;178590682;178590681 | chr2:179455410;179455409;179455408 |
N2A | 17780 | 53563;53564;53565 | chr2:178590683;178590682;178590681 | chr2:179455410;179455409;179455408 |
N2B | 11283 | 34072;34073;34074 | chr2:178590683;178590682;178590681 | chr2:179455410;179455409;179455408 |
Novex-1 | 11408 | 34447;34448;34449 | chr2:178590683;178590682;178590681 | chr2:179455410;179455409;179455408 |
Novex-2 | 11475 | 34648;34649;34650 | chr2:178590683;178590682;178590681 | chr2:179455410;179455409;179455408 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs754621313 | -1.125 | 0.999 | N | 0.662 | 0.405 | 0.371157983038 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/G | None | None | 1.0 | N | 0.749 | 0.523 | 0.467247493403 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4008 | ambiguous | 0.4254 | ambiguous | -1.07 | Destabilizing | 0.999 | D | 0.662 | neutral | N | 0.468024195 | None | None | I |
E/C | 0.9175 | likely_pathogenic | 0.9366 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
E/D | 0.645 | likely_pathogenic | 0.7454 | pathogenic | -1.481 | Destabilizing | 0.999 | D | 0.464 | neutral | N | 0.496550157 | None | None | I |
E/F | 0.925 | likely_pathogenic | 0.9361 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
E/G | 0.5351 | ambiguous | 0.5434 | ambiguous | -1.474 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.503133523 | None | None | I |
E/H | 0.7933 | likely_pathogenic | 0.8377 | pathogenic | -0.998 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
E/I | 0.5122 | ambiguous | 0.5796 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
E/K | 0.2558 | likely_benign | 0.2986 | benign | -0.871 | Destabilizing | 0.999 | D | 0.522 | neutral | N | 0.465581887 | None | None | I |
E/L | 0.6587 | likely_pathogenic | 0.7245 | pathogenic | 0.055 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
E/M | 0.5997 | likely_pathogenic | 0.649 | pathogenic | 0.683 | Stabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
E/N | 0.7504 | likely_pathogenic | 0.8168 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
E/P | 0.995 | likely_pathogenic | 0.9964 | pathogenic | -0.299 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
E/Q | 0.187 | likely_benign | 0.2162 | benign | -1.145 | Destabilizing | 1.0 | D | 0.616 | neutral | D | 0.522865901 | None | None | I |
E/R | 0.4739 | ambiguous | 0.5229 | ambiguous | -0.719 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/S | 0.5488 | ambiguous | 0.6016 | pathogenic | -1.796 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | I |
E/T | 0.5531 | ambiguous | 0.6065 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
E/V | 0.3235 | likely_benign | 0.3621 | ambiguous | -0.299 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.469044485 | None | None | I |
E/W | 0.9726 | likely_pathogenic | 0.9804 | pathogenic | -0.585 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
E/Y | 0.8848 | likely_pathogenic | 0.9064 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.