Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20351 | 61276;61277;61278 | chr2:178590674;178590673;178590672 | chr2:179455401;179455400;179455399 |
N2AB | 18710 | 56353;56354;56355 | chr2:178590674;178590673;178590672 | chr2:179455401;179455400;179455399 |
N2A | 17783 | 53572;53573;53574 | chr2:178590674;178590673;178590672 | chr2:179455401;179455400;179455399 |
N2B | 11286 | 34081;34082;34083 | chr2:178590674;178590673;178590672 | chr2:179455401;179455400;179455399 |
Novex-1 | 11411 | 34456;34457;34458 | chr2:178590674;178590673;178590672 | chr2:179455401;179455400;179455399 |
Novex-2 | 11478 | 34657;34658;34659 | chr2:178590674;178590673;178590672 | chr2:179455401;179455400;179455399 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.989 | N | 0.592 | 0.333 | 0.33110744837 | gnomAD-4.0.0 | 1.36892E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79943E-06 | 0 | 0 |
A/T | None | None | 0.977 | N | 0.628 | 0.399 | 0.357724736475 | gnomAD-4.0.0 | 3.1851E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72135E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6168 | likely_pathogenic | 0.6391 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
A/D | 0.9236 | likely_pathogenic | 0.9414 | pathogenic | -0.471 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
A/E | 0.8671 | likely_pathogenic | 0.8817 | pathogenic | -0.624 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | N | 0.486257036 | None | None | I |
A/F | 0.7385 | likely_pathogenic | 0.748 | pathogenic | -0.904 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | I |
A/G | 0.3907 | ambiguous | 0.4129 | ambiguous | -0.34 | Destabilizing | 0.989 | D | 0.592 | neutral | N | 0.482711863 | None | None | I |
A/H | 0.9027 | likely_pathogenic | 0.9171 | pathogenic | -0.238 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
A/I | 0.4878 | ambiguous | 0.5196 | ambiguous | -0.427 | Destabilizing | 0.966 | D | 0.608 | neutral | None | None | None | None | I |
A/K | 0.9528 | likely_pathogenic | 0.9548 | pathogenic | -0.618 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | I |
A/L | 0.5133 | ambiguous | 0.5741 | pathogenic | -0.427 | Destabilizing | 0.966 | D | 0.495 | neutral | None | None | None | None | I |
A/M | 0.6093 | likely_pathogenic | 0.611 | pathogenic | -0.533 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | I |
A/N | 0.864 | likely_pathogenic | 0.8712 | pathogenic | -0.346 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
A/P | 0.9006 | likely_pathogenic | 0.9292 | pathogenic | -0.358 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | D | 0.532495632 | None | None | I |
A/Q | 0.8549 | likely_pathogenic | 0.8508 | pathogenic | -0.625 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
A/R | 0.8802 | likely_pathogenic | 0.8847 | pathogenic | -0.121 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | I |
A/S | 0.232 | likely_benign | 0.2091 | benign | -0.556 | Destabilizing | 0.989 | D | 0.589 | neutral | N | 0.479802255 | None | None | I |
A/T | 0.4427 | ambiguous | 0.4007 | ambiguous | -0.63 | Destabilizing | 0.977 | D | 0.628 | neutral | N | 0.495273164 | None | None | I |
A/V | 0.2322 | likely_benign | 0.2124 | benign | -0.358 | Destabilizing | 0.117 | N | 0.33 | neutral | N | 0.474074664 | None | None | I |
A/W | 0.9533 | likely_pathogenic | 0.9633 | pathogenic | -1.001 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
A/Y | 0.8642 | likely_pathogenic | 0.8788 | pathogenic | -0.681 | Destabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.