Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20371 | 61336;61337;61338 | chr2:178590614;178590613;178590612 | chr2:179455341;179455340;179455339 |
N2AB | 18730 | 56413;56414;56415 | chr2:178590614;178590613;178590612 | chr2:179455341;179455340;179455339 |
N2A | 17803 | 53632;53633;53634 | chr2:178590614;178590613;178590612 | chr2:179455341;179455340;179455339 |
N2B | 11306 | 34141;34142;34143 | chr2:178590614;178590613;178590612 | chr2:179455341;179455340;179455339 |
Novex-1 | 11431 | 34516;34517;34518 | chr2:178590614;178590613;178590612 | chr2:179455341;179455340;179455339 |
Novex-2 | 11498 | 34717;34718;34719 | chr2:178590614;178590613;178590612 | chr2:179455341;179455340;179455339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs1227565945 | -0.168 | 0.953 | N | 0.601 | 0.263 | 0.232513804876 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
P/T | rs1227565945 | -0.168 | 0.953 | N | 0.601 | 0.263 | 0.232513804876 | gnomAD-4.0.0 | 1.59326E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77824E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1152 | likely_benign | 0.1097 | benign | -0.401 | Destabilizing | 0.893 | D | 0.491 | neutral | N | 0.448940483 | None | None | I |
P/C | 0.629 | likely_pathogenic | 0.5871 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
P/D | 0.8844 | likely_pathogenic | 0.8376 | pathogenic | 0.046 | Stabilizing | 0.998 | D | 0.538 | neutral | None | None | None | None | I |
P/E | 0.6108 | likely_pathogenic | 0.5044 | ambiguous | -0.071 | Destabilizing | 0.998 | D | 0.505 | neutral | None | None | None | None | I |
P/F | 0.7889 | likely_pathogenic | 0.7257 | pathogenic | -0.722 | Destabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | I |
P/G | 0.6961 | likely_pathogenic | 0.6613 | pathogenic | -0.511 | Destabilizing | 0.998 | D | 0.547 | neutral | None | None | None | None | I |
P/H | 0.5165 | ambiguous | 0.432 | ambiguous | -0.146 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/I | 0.325 | likely_benign | 0.2446 | benign | -0.27 | Destabilizing | 0.931 | D | 0.614 | neutral | None | None | None | None | I |
P/K | 0.4458 | ambiguous | 0.3552 | ambiguous | -0.173 | Destabilizing | 0.998 | D | 0.511 | neutral | None | None | None | None | I |
P/L | 0.1703 | likely_benign | 0.14 | benign | -0.27 | Destabilizing | 0.91 | D | 0.609 | neutral | N | 0.502247408 | None | None | I |
P/M | 0.3889 | ambiguous | 0.3305 | benign | -0.263 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | I |
P/N | 0.731 | likely_pathogenic | 0.6454 | pathogenic | 0.041 | Stabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | I |
P/Q | 0.3248 | likely_benign | 0.2548 | benign | -0.204 | Destabilizing | 0.998 | D | 0.501 | neutral | N | 0.473453974 | None | None | I |
P/R | 0.3628 | ambiguous | 0.2899 | benign | 0.266 | Stabilizing | 0.998 | D | 0.823 | deleterious | N | 0.459108701 | None | None | I |
P/S | 0.3573 | ambiguous | 0.305 | benign | -0.366 | Destabilizing | 0.993 | D | 0.503 | neutral | N | 0.466617119 | None | None | I |
P/T | 0.2101 | likely_benign | 0.1646 | benign | -0.379 | Destabilizing | 0.953 | D | 0.601 | neutral | N | 0.491686484 | None | None | I |
P/V | 0.2066 | likely_benign | 0.164 | benign | -0.28 | Destabilizing | 0.132 | N | 0.442 | neutral | None | None | None | None | I |
P/W | 0.9105 | likely_pathogenic | 0.8848 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
P/Y | 0.7518 | likely_pathogenic | 0.6882 | pathogenic | -0.447 | Destabilizing | 0.998 | D | 0.803 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.