Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20375 | 61348;61349;61350 | chr2:178590602;178590601;178590600 | chr2:179455329;179455328;179455327 |
N2AB | 18734 | 56425;56426;56427 | chr2:178590602;178590601;178590600 | chr2:179455329;179455328;179455327 |
N2A | 17807 | 53644;53645;53646 | chr2:178590602;178590601;178590600 | chr2:179455329;179455328;179455327 |
N2B | 11310 | 34153;34154;34155 | chr2:178590602;178590601;178590600 | chr2:179455329;179455328;179455327 |
Novex-1 | 11435 | 34528;34529;34530 | chr2:178590602;178590601;178590600 | chr2:179455329;179455328;179455327 |
Novex-2 | 11502 | 34729;34730;34731 | chr2:178590602;178590601;178590600 | chr2:179455329;179455328;179455327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1576090518 | None | 1.0 | N | 0.831 | 0.526 | 0.600586691565 | gnomAD-4.0.0 | 4.78043E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.30812E-05 | 0 |
P/L | None | None | 1.0 | D | 0.923 | 0.564 | 0.632073011451 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9063 | likely_pathogenic | 0.8474 | pathogenic | -2.533 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.519581705 | None | None | N |
P/C | 0.9836 | likely_pathogenic | 0.9651 | pathogenic | -2.108 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
P/D | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -3.42 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
P/E | 0.9993 | likely_pathogenic | 0.9987 | pathogenic | -3.159 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/F | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.931 | deleterious | None | None | None | None | N |
P/G | 0.9953 | likely_pathogenic | 0.9926 | pathogenic | -3.061 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
P/H | 0.9989 | likely_pathogenic | 0.9981 | pathogenic | -2.755 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.563881291 | None | None | N |
P/I | 0.9792 | likely_pathogenic | 0.9687 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
P/K | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -2.099 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/L | 0.9706 | likely_pathogenic | 0.9529 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.923 | deleterious | D | 0.551511028 | None | None | N |
P/M | 0.9951 | likely_pathogenic | 0.9914 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/N | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -2.576 | Highly Destabilizing | 1.0 | D | 0.939 | deleterious | None | None | None | None | N |
P/Q | 0.9986 | likely_pathogenic | 0.9973 | pathogenic | -2.324 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
P/R | 0.9984 | likely_pathogenic | 0.9972 | pathogenic | -1.967 | Destabilizing | 1.0 | D | 0.939 | deleterious | D | 0.563627802 | None | None | N |
P/S | 0.9926 | likely_pathogenic | 0.9862 | pathogenic | -3.093 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | D | 0.552018007 | None | None | N |
P/T | 0.9785 | likely_pathogenic | 0.9637 | pathogenic | -2.705 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.563374312 | None | None | N |
P/V | 0.92 | likely_pathogenic | 0.8827 | pathogenic | -1.498 | Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.849 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
P/Y | 0.9998 | likely_pathogenic | 0.9996 | pathogenic | -1.602 | Destabilizing | 1.0 | D | 0.936 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.