Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20386 | 61381;61382;61383 | chr2:178590569;178590568;178590567 | chr2:179455296;179455295;179455294 |
N2AB | 18745 | 56458;56459;56460 | chr2:178590569;178590568;178590567 | chr2:179455296;179455295;179455294 |
N2A | 17818 | 53677;53678;53679 | chr2:178590569;178590568;178590567 | chr2:179455296;179455295;179455294 |
N2B | 11321 | 34186;34187;34188 | chr2:178590569;178590568;178590567 | chr2:179455296;179455295;179455294 |
Novex-1 | 11446 | 34561;34562;34563 | chr2:178590569;178590568;178590567 | chr2:179455296;179455295;179455294 |
Novex-2 | 11513 | 34762;34763;34764 | chr2:178590569;178590568;178590567 | chr2:179455296;179455295;179455294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.954 | N | 0.545 | 0.127 | 0.332646915603 | gnomAD-4.0.0 | 1.59402E-06 | None | None | None | None | N | None | 5.67408E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2105 | likely_benign | 0.2086 | benign | -0.596 | Destabilizing | 0.91 | D | 0.522 | neutral | N | 0.463569668 | None | None | N |
E/C | 0.8454 | likely_pathogenic | 0.8597 | pathogenic | -0.024 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/D | 0.138 | likely_benign | 0.1291 | benign | -0.631 | Destabilizing | 0.954 | D | 0.545 | neutral | N | 0.384895454 | None | None | N |
E/F | 0.795 | likely_pathogenic | 0.7984 | pathogenic | -0.555 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
E/G | 0.2198 | likely_benign | 0.2101 | benign | -0.838 | Destabilizing | 0.98 | D | 0.509 | neutral | N | 0.436287067 | None | None | N |
E/H | 0.5357 | ambiguous | 0.5253 | ambiguous | -0.683 | Destabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | N |
E/I | 0.5132 | ambiguous | 0.5084 | ambiguous | 0.021 | Stabilizing | 0.991 | D | 0.607 | neutral | None | None | None | None | N |
E/K | 0.2637 | likely_benign | 0.244 | benign | 0.055 | Stabilizing | 0.961 | D | 0.547 | neutral | N | 0.450928445 | None | None | N |
E/L | 0.5172 | ambiguous | 0.515 | ambiguous | 0.021 | Stabilizing | 0.97 | D | 0.54 | neutral | None | None | None | None | N |
E/M | 0.5255 | ambiguous | 0.5394 | ambiguous | 0.378 | Stabilizing | 1.0 | D | 0.57 | neutral | None | None | None | None | N |
E/N | 0.2523 | likely_benign | 0.2507 | benign | -0.223 | Destabilizing | 0.985 | D | 0.493 | neutral | None | None | None | None | N |
E/P | 0.9633 | likely_pathogenic | 0.9438 | pathogenic | -0.164 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
E/Q | 0.1805 | likely_benign | 0.1777 | benign | -0.194 | Destabilizing | 0.993 | D | 0.506 | neutral | N | 0.45387275 | None | None | N |
E/R | 0.4331 | ambiguous | 0.3959 | ambiguous | 0.148 | Stabilizing | 0.996 | D | 0.47 | neutral | None | None | None | None | N |
E/S | 0.2206 | likely_benign | 0.2249 | benign | -0.421 | Destabilizing | 0.942 | D | 0.53 | neutral | None | None | None | None | N |
E/T | 0.2014 | likely_benign | 0.2081 | benign | -0.229 | Destabilizing | 0.155 | N | 0.197 | neutral | None | None | None | None | N |
E/V | 0.3041 | likely_benign | 0.3002 | benign | -0.164 | Destabilizing | 0.961 | D | 0.501 | neutral | N | 0.515998644 | None | None | N |
E/W | 0.9229 | likely_pathogenic | 0.9166 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/Y | 0.6525 | likely_pathogenic | 0.6429 | pathogenic | -0.316 | Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.