Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20389 | 61390;61391;61392 | chr2:178590560;178590559;178590558 | chr2:179455287;179455286;179455285 |
N2AB | 18748 | 56467;56468;56469 | chr2:178590560;178590559;178590558 | chr2:179455287;179455286;179455285 |
N2A | 17821 | 53686;53687;53688 | chr2:178590560;178590559;178590558 | chr2:179455287;179455286;179455285 |
N2B | 11324 | 34195;34196;34197 | chr2:178590560;178590559;178590558 | chr2:179455287;179455286;179455285 |
Novex-1 | 11449 | 34570;34571;34572 | chr2:178590560;178590559;178590558 | chr2:179455287;179455286;179455285 |
Novex-2 | 11516 | 34771;34772;34773 | chr2:178590560;178590559;178590558 | chr2:179455287;179455286;179455285 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1410268896 | None | 0.997 | N | 0.771 | 0.352 | 0.354610295913 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/H | rs1410268896 | None | 0.997 | N | 0.771 | 0.352 | 0.354610295913 | gnomAD-4.0.0 | 6.57748E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47128E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7477 | likely_pathogenic | 0.7118 | pathogenic | -0.344 | Destabilizing | 0.865 | D | 0.621 | neutral | N | 0.472495796 | None | None | N |
D/C | 0.941 | likely_pathogenic | 0.9374 | pathogenic | -0.296 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
D/E | 0.5469 | ambiguous | 0.5496 | ambiguous | -0.894 | Destabilizing | 0.039 | N | 0.289 | neutral | N | 0.482307358 | None | None | N |
D/F | 0.9084 | likely_pathogenic | 0.8978 | pathogenic | -0.423 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
D/G | 0.8769 | likely_pathogenic | 0.8374 | pathogenic | -0.688 | Destabilizing | 0.928 | D | 0.603 | neutral | N | 0.467734707 | None | None | N |
D/H | 0.8174 | likely_pathogenic | 0.7713 | pathogenic | -0.931 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.512803623 | None | None | N |
D/I | 0.8732 | likely_pathogenic | 0.8387 | pathogenic | 0.556 | Stabilizing | 0.992 | D | 0.836 | deleterious | None | None | None | None | N |
D/K | 0.9529 | likely_pathogenic | 0.9331 | pathogenic | -0.685 | Destabilizing | 0.968 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/L | 0.8627 | likely_pathogenic | 0.838 | pathogenic | 0.556 | Stabilizing | 0.983 | D | 0.791 | deleterious | None | None | None | None | N |
D/M | 0.9419 | likely_pathogenic | 0.9341 | pathogenic | 0.998 | Stabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
D/N | 0.4735 | ambiguous | 0.4279 | ambiguous | -0.909 | Destabilizing | 0.978 | D | 0.657 | neutral | N | 0.48074992 | None | None | N |
D/P | 0.996 | likely_pathogenic | 0.9954 | pathogenic | 0.282 | Stabilizing | 0.992 | D | 0.744 | deleterious | None | None | None | None | N |
D/Q | 0.9022 | likely_pathogenic | 0.8811 | pathogenic | -0.747 | Destabilizing | 0.968 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/R | 0.9603 | likely_pathogenic | 0.9424 | pathogenic | -0.725 | Destabilizing | 0.983 | D | 0.757 | deleterious | None | None | None | None | N |
D/S | 0.5244 | ambiguous | 0.4708 | ambiguous | -1.242 | Destabilizing | 0.895 | D | 0.51 | neutral | None | None | None | None | N |
D/T | 0.7235 | likely_pathogenic | 0.6543 | pathogenic | -0.96 | Destabilizing | 0.983 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/V | 0.7274 | likely_pathogenic | 0.6788 | pathogenic | 0.282 | Stabilizing | 0.978 | D | 0.778 | deleterious | N | 0.462662804 | None | None | N |
D/W | 0.9828 | likely_pathogenic | 0.9791 | pathogenic | -0.53 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
D/Y | 0.6802 | likely_pathogenic | 0.621 | pathogenic | -0.263 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.522481899 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.