Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20390 | 61393;61394;61395 | chr2:178590557;178590556;178590555 | chr2:179455284;179455283;179455282 |
N2AB | 18749 | 56470;56471;56472 | chr2:178590557;178590556;178590555 | chr2:179455284;179455283;179455282 |
N2A | 17822 | 53689;53690;53691 | chr2:178590557;178590556;178590555 | chr2:179455284;179455283;179455282 |
N2B | 11325 | 34198;34199;34200 | chr2:178590557;178590556;178590555 | chr2:179455284;179455283;179455282 |
Novex-1 | 11450 | 34573;34574;34575 | chr2:178590557;178590556;178590555 | chr2:179455284;179455283;179455282 |
Novex-2 | 11517 | 34774;34775;34776 | chr2:178590557;178590556;178590555 | chr2:179455284;179455283;179455282 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.76 | 0.427 | 0.583177444714 | gnomAD-4.0.0 | 6.84727E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99886E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9752 | likely_pathogenic | 0.9717 | pathogenic | -2.548 | Highly Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/C | 0.9718 | likely_pathogenic | 0.9664 | pathogenic | -1.617 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.357 | Highly Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
L/E | 0.9986 | likely_pathogenic | 0.9984 | pathogenic | -3.027 | Highly Destabilizing | 1.0 | D | 0.92 | deleterious | None | None | None | None | N |
L/F | 0.7532 | likely_pathogenic | 0.7032 | pathogenic | -1.568 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.509226817 | None | None | N |
L/G | 0.9976 | likely_pathogenic | 0.9972 | pathogenic | -3.149 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | None | None | None | None | N |
L/H | 0.9969 | likely_pathogenic | 0.9962 | pathogenic | -2.982 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/I | 0.1388 | likely_benign | 0.1242 | benign | -0.73 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
L/K | 0.9972 | likely_pathogenic | 0.9969 | pathogenic | -2.0 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/M | 0.3655 | ambiguous | 0.3747 | ambiguous | -0.87 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.509733796 | None | None | N |
L/N | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -2.798 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
L/P | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.936 | deleterious | None | None | None | None | N |
L/Q | 0.9967 | likely_pathogenic | 0.996 | pathogenic | -2.384 | Highly Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
L/R | 0.9953 | likely_pathogenic | 0.9944 | pathogenic | -2.203 | Highly Destabilizing | 1.0 | D | 0.914 | deleterious | None | None | None | None | N |
L/S | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -3.259 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | D | 0.539954825 | None | None | N |
L/T | 0.985 | likely_pathogenic | 0.9811 | pathogenic | -2.759 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
L/V | 0.267 | likely_benign | 0.2241 | benign | -1.329 | Destabilizing | 0.999 | D | 0.586 | neutral | N | 0.49648459 | None | None | N |
L/W | 0.9856 | likely_pathogenic | 0.9804 | pathogenic | -1.961 | Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.539954825 | None | None | N |
L/Y | 0.9863 | likely_pathogenic | 0.9828 | pathogenic | -1.748 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.