Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20391 | 61396;61397;61398 | chr2:178590554;178590553;178590552 | chr2:179455281;179455280;179455279 |
N2AB | 18750 | 56473;56474;56475 | chr2:178590554;178590553;178590552 | chr2:179455281;179455280;179455279 |
N2A | 17823 | 53692;53693;53694 | chr2:178590554;178590553;178590552 | chr2:179455281;179455280;179455279 |
N2B | 11326 | 34201;34202;34203 | chr2:178590554;178590553;178590552 | chr2:179455281;179455280;179455279 |
Novex-1 | 11451 | 34576;34577;34578 | chr2:178590554;178590553;178590552 | chr2:179455281;179455280;179455279 |
Novex-2 | 11518 | 34777;34778;34779 | chr2:178590554;178590553;178590552 | chr2:179455281;179455280;179455279 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 1.0 | N | 0.806 | 0.455 | 0.648059144284 | gnomAD-4.0.0 | 1.59391E-06 | None | None | None | None | N | None | 0 | 2.29211E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3693 | ambiguous | 0.3133 | benign | -1.721 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.447194707 | None | None | N |
V/C | 0.7409 | likely_pathogenic | 0.699 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.8668 | likely_pathogenic | 0.812 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/E | 0.6459 | likely_pathogenic | 0.5904 | pathogenic | -2.01 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.43628428 | None | None | N |
V/F | 0.3239 | likely_benign | 0.2896 | benign | -1.112 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/G | 0.5124 | ambiguous | 0.4299 | ambiguous | -2.179 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | N | 0.490542839 | None | None | N |
V/H | 0.8501 | likely_pathogenic | 0.8005 | pathogenic | -1.963 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
V/I | 0.0918 | likely_benign | 0.0871 | benign | -0.488 | Destabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
V/K | 0.8345 | likely_pathogenic | 0.782 | pathogenic | -1.517 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
V/L | 0.2947 | likely_benign | 0.2533 | benign | -0.488 | Destabilizing | 0.997 | D | 0.555 | neutral | N | 0.479325768 | None | None | N |
V/M | 0.271 | likely_benign | 0.229 | benign | -0.3 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.509648675 | None | None | N |
V/N | 0.6799 | likely_pathogenic | 0.5665 | pathogenic | -1.612 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
V/P | 0.9898 | likely_pathogenic | 0.9881 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/Q | 0.6016 | likely_pathogenic | 0.5282 | ambiguous | -1.572 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/R | 0.7644 | likely_pathogenic | 0.7023 | pathogenic | -1.211 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
V/S | 0.4375 | ambiguous | 0.3518 | ambiguous | -2.152 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/T | 0.3193 | likely_benign | 0.2626 | benign | -1.885 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9397 | likely_pathogenic | 0.9231 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.7441 | likely_pathogenic | 0.6943 | pathogenic | -1.207 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.