Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20402 | 61429;61430;61431 | chr2:178590521;178590520;178590519 | chr2:179455248;179455247;179455246 |
N2AB | 18761 | 56506;56507;56508 | chr2:178590521;178590520;178590519 | chr2:179455248;179455247;179455246 |
N2A | 17834 | 53725;53726;53727 | chr2:178590521;178590520;178590519 | chr2:179455248;179455247;179455246 |
N2B | 11337 | 34234;34235;34236 | chr2:178590521;178590520;178590519 | chr2:179455248;179455247;179455246 |
Novex-1 | 11462 | 34609;34610;34611 | chr2:178590521;178590520;178590519 | chr2:179455248;179455247;179455246 |
Novex-2 | 11529 | 34810;34811;34812 | chr2:178590521;178590520;178590519 | chr2:179455248;179455247;179455246 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 1.0 | N | 0.628 | 0.464 | 0.432826170204 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1808 | likely_benign | 0.1574 | benign | -0.584 | Destabilizing | 0.767 | D | 0.435 | neutral | N | 0.497769882 | None | None | I |
P/C | 0.8401 | likely_pathogenic | 0.7894 | pathogenic | -0.684 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | I |
P/D | 0.7589 | likely_pathogenic | 0.7015 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.672 | neutral | None | None | None | None | I |
P/E | 0.5547 | ambiguous | 0.4753 | ambiguous | -0.277 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
P/F | 0.8916 | likely_pathogenic | 0.8536 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
P/G | 0.6977 | likely_pathogenic | 0.6295 | pathogenic | -0.754 | Destabilizing | 0.997 | D | 0.608 | neutral | None | None | None | None | I |
P/H | 0.5231 | ambiguous | 0.4453 | ambiguous | -0.242 | Destabilizing | 1.0 | D | 0.628 | neutral | N | 0.481726542 | None | None | I |
P/I | 0.6516 | likely_pathogenic | 0.5918 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
P/K | 0.621 | likely_pathogenic | 0.5074 | ambiguous | -0.493 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
P/L | 0.3545 | ambiguous | 0.3091 | benign | -0.277 | Destabilizing | 0.999 | D | 0.669 | neutral | N | 0.487411308 | None | None | I |
P/M | 0.636 | likely_pathogenic | 0.5778 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | I |
P/N | 0.6686 | likely_pathogenic | 0.5779 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
P/Q | 0.3807 | ambiguous | 0.3121 | benign | -0.464 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
P/R | 0.4801 | ambiguous | 0.3941 | ambiguous | 0.021 | Stabilizing | 0.999 | D | 0.669 | neutral | N | 0.465304127 | None | None | I |
P/S | 0.364 | ambiguous | 0.287 | benign | -0.682 | Destabilizing | 0.998 | D | 0.614 | neutral | N | 0.470001388 | None | None | I |
P/T | 0.3122 | likely_benign | 0.2482 | benign | -0.664 | Destabilizing | 0.999 | D | 0.616 | neutral | N | 0.473141714 | None | None | I |
P/V | 0.4441 | ambiguous | 0.3984 | ambiguous | -0.343 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
P/W | 0.9466 | likely_pathogenic | 0.9242 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | I |
P/Y | 0.8477 | likely_pathogenic | 0.7899 | pathogenic | -0.44 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.