Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20403 | 61432;61433;61434 | chr2:178590518;178590517;178590516 | chr2:179455245;179455244;179455243 |
N2AB | 18762 | 56509;56510;56511 | chr2:178590518;178590517;178590516 | chr2:179455245;179455244;179455243 |
N2A | 17835 | 53728;53729;53730 | chr2:178590518;178590517;178590516 | chr2:179455245;179455244;179455243 |
N2B | 11338 | 34237;34238;34239 | chr2:178590518;178590517;178590516 | chr2:179455245;179455244;179455243 |
Novex-1 | 11463 | 34612;34613;34614 | chr2:178590518;178590517;178590516 | chr2:179455245;179455244;179455243 |
Novex-2 | 11530 | 34813;34814;34815 | chr2:178590518;178590517;178590516 | chr2:179455245;179455244;179455243 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs757910559 | -2.068 | 0.978 | N | 0.765 | 0.526 | 0.710765558589 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | I | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs757910559 | -2.068 | 0.978 | N | 0.765 | 0.526 | 0.710765558589 | gnomAD-4.0.0 | 1.36898E-06 | None | None | None | None | I | None | 0 | 4.47708E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | None | None | 0.198 | N | 0.235 | 0.127 | 0.407082143382 | gnomAD-4.0.0 | 1.59278E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43419E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.988 | likely_pathogenic | 0.984 | pathogenic | -1.991 | Destabilizing | 0.983 | D | 0.678 | prob.neutral | None | None | None | None | I |
I/C | 0.9886 | likely_pathogenic | 0.9857 | pathogenic | -1.061 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
I/D | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -1.509 | Destabilizing | 0.999 | D | 0.818 | deleterious | None | None | None | None | I |
I/E | 0.9978 | likely_pathogenic | 0.9971 | pathogenic | -1.452 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
I/F | 0.9499 | likely_pathogenic | 0.9366 | pathogenic | -1.302 | Destabilizing | 0.997 | D | 0.733 | prob.delet. | N | 0.521903477 | None | None | I |
I/G | 0.9984 | likely_pathogenic | 0.9979 | pathogenic | -2.383 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
I/H | 0.9982 | likely_pathogenic | 0.9974 | pathogenic | -1.585 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
I/K | 0.9962 | likely_pathogenic | 0.9943 | pathogenic | -1.363 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | I |
I/L | 0.4512 | ambiguous | 0.4466 | ambiguous | -0.947 | Destabilizing | 0.798 | D | 0.449 | neutral | N | 0.480085879 | None | None | I |
I/M | 0.7655 | likely_pathogenic | 0.7273 | pathogenic | -0.653 | Destabilizing | 0.997 | D | 0.705 | prob.neutral | D | 0.531021737 | None | None | I |
I/N | 0.99 | likely_pathogenic | 0.9846 | pathogenic | -1.218 | Destabilizing | 0.999 | D | 0.822 | deleterious | D | 0.543556585 | None | None | I |
I/P | 0.9876 | likely_pathogenic | 0.9851 | pathogenic | -1.266 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | I |
I/Q | 0.997 | likely_pathogenic | 0.9959 | pathogenic | -1.34 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
I/R | 0.9941 | likely_pathogenic | 0.9919 | pathogenic | -0.792 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | I |
I/S | 0.9906 | likely_pathogenic | 0.9862 | pathogenic | -1.882 | Destabilizing | 0.997 | D | 0.785 | deleterious | D | 0.524691861 | None | None | I |
I/T | 0.9826 | likely_pathogenic | 0.9727 | pathogenic | -1.702 | Destabilizing | 0.978 | D | 0.765 | deleterious | N | 0.513335556 | None | None | I |
I/V | 0.1123 | likely_benign | 0.1035 | benign | -1.266 | Destabilizing | 0.198 | N | 0.235 | neutral | N | 0.479696701 | None | None | I |
I/W | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -1.445 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
I/Y | 0.9944 | likely_pathogenic | 0.9922 | pathogenic | -1.225 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.