Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20410 | 61453;61454;61455 | chr2:178590497;178590496;178590495 | chr2:179455224;179455223;179455222 |
N2AB | 18769 | 56530;56531;56532 | chr2:178590497;178590496;178590495 | chr2:179455224;179455223;179455222 |
N2A | 17842 | 53749;53750;53751 | chr2:178590497;178590496;178590495 | chr2:179455224;179455223;179455222 |
N2B | 11345 | 34258;34259;34260 | chr2:178590497;178590496;178590495 | chr2:179455224;179455223;179455222 |
Novex-1 | 11470 | 34633;34634;34635 | chr2:178590497;178590496;178590495 | chr2:179455224;179455223;179455222 |
Novex-2 | 11537 | 34834;34835;34836 | chr2:178590497;178590496;178590495 | chr2:179455224;179455223;179455222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs2049975151 | None | None | N | 0.634 | 0.158 | 0.412458657427 | gnomAD-4.0.0 | 1.36892E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99726E-07 | 0 | 1.657E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4691 | ambiguous | 0.4135 | ambiguous | -1.443 | Destabilizing | 0.067 | N | 0.636 | neutral | None | None | None | None | N |
C/D | 0.95 | likely_pathogenic | 0.8954 | pathogenic | -1.661 | Destabilizing | 0.555 | D | 0.823 | deleterious | None | None | None | None | N |
C/E | 0.918 | likely_pathogenic | 0.8499 | pathogenic | -1.412 | Destabilizing | 0.555 | D | 0.821 | deleterious | None | None | None | None | N |
C/F | 0.1746 | likely_benign | 0.1303 | benign | -0.86 | Destabilizing | 0.188 | N | 0.796 | deleterious | N | 0.461049438 | None | None | N |
C/G | 0.419 | ambiguous | 0.3542 | ambiguous | -1.787 | Destabilizing | 0.211 | N | 0.82 | deleterious | N | 0.478424478 | None | None | N |
C/H | 0.67 | likely_pathogenic | 0.5282 | ambiguous | -2.024 | Highly Destabilizing | 0.38 | N | 0.791 | deleterious | None | None | None | None | N |
C/I | 0.3892 | ambiguous | 0.3078 | benign | -0.503 | Destabilizing | 0.081 | N | 0.757 | deleterious | None | None | None | None | N |
C/K | 0.8748 | likely_pathogenic | 0.8049 | pathogenic | -1.064 | Destabilizing | 0.38 | N | 0.826 | deleterious | None | None | None | None | N |
C/L | 0.3958 | ambiguous | 0.32 | benign | -0.503 | Destabilizing | 0.035 | N | 0.653 | neutral | None | None | None | None | N |
C/M | 0.3942 | ambiguous | 0.3612 | ambiguous | -0.022 | Destabilizing | 0.007 | N | 0.529 | neutral | None | None | None | None | N |
C/N | 0.7924 | likely_pathogenic | 0.6837 | pathogenic | -1.749 | Destabilizing | 0.555 | D | 0.819 | deleterious | None | None | None | None | N |
C/P | 0.9982 | likely_pathogenic | 0.9956 | pathogenic | -0.797 | Destabilizing | 0.791 | D | 0.821 | deleterious | None | None | None | None | N |
C/Q | 0.7248 | likely_pathogenic | 0.6258 | pathogenic | -1.217 | Destabilizing | 0.555 | D | 0.819 | deleterious | None | None | None | None | N |
C/R | 0.6775 | likely_pathogenic | 0.5594 | ambiguous | -1.569 | Destabilizing | 0.317 | N | 0.823 | deleterious | N | 0.425379427 | None | None | N |
C/S | 0.4386 | ambiguous | 0.3606 | ambiguous | -1.983 | Destabilizing | 0.117 | N | 0.762 | deleterious | N | 0.439924805 | None | None | N |
C/T | 0.5928 | likely_pathogenic | 0.5154 | ambiguous | -1.564 | Destabilizing | 0.149 | N | 0.759 | deleterious | None | None | None | None | N |
C/V | 0.3538 | ambiguous | 0.3029 | benign | -0.797 | Destabilizing | 0.081 | N | 0.707 | prob.neutral | None | None | None | None | N |
C/W | 0.5174 | ambiguous | 0.3999 | ambiguous | -1.359 | Destabilizing | 0.78 | D | 0.745 | deleterious | N | 0.479115124 | None | None | N |
C/Y | 0.2177 | likely_benign | 0.1463 | benign | -1.107 | Destabilizing | None | N | 0.634 | neutral | N | 0.399416616 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.